Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Rsph17025_1973 |
Symbol | |
ID | 5082337 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Rhodobacter sphaeroides ATCC 17025 |
Kingdom | Bacteria |
Replicon accession | NC_009428 |
Strand | + |
Start bp | 2014402 |
End bp | 2015703 |
Gene Length | 1302 bp |
Protein Length | 433 aa |
Translation table | 11 |
GC content | 68% |
IMG OID | 640483535 |
Product | O-antigen polymerase |
Protein accession | YP_001168169 |
Protein GI | 146278010 |
COG category | [M] Cell wall/membrane/envelope biogenesis |
COG ID | [COG3307] Lipid A core - O-antigen ligase and related enzymes |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 13 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 15 |
Fosmid unclonability p-value | 0.15228 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | ATGACCGCCG CCCCCCTGCG CCCGCACCGC CATGACGGCA TGATCATCGA CGTCTGCCCG ACCACGGTGC TGGCCTTCCT GACCATCCTG TGCCTCCTGC TGGTGCAGTG GATCGGATCC ATGGCGGCGG CGGGCTTCCT GGCCTCGGGC TGCCTGCTTG TGGTGCGACG GCCGCAGACC ACGCTGATGG AGCTGCGGCG CTACTGGATG ATCTTCGCCA TCGCCGCCTG GTGCCTCTTC ACGGTGCTCT GGTCGCAATA TGCCTCGCTC AGCCTGCGCT ACGGCATTCA GCTCTGCGTG ACCTTCGCCA TCGCCGTGGC GATCGCCAGC CGGCTCTCGC CGATCGTCTT CCTGCGCATC CTCTTCAGCG CGCATCTCAT CGCGGCCGTG CTGAGCCTCG TGTTCGGAAA GGTCCGGGCG GACGGGCTCG GCTGGCTGGG CATCTTCGGC TCGAAGAACG CCTTCTCGCT GCCGATGTCC ACCCTGATGC TCTGCGCCTT CGCCATCATG CTCGATCGCA ACCAGTCACG GATGTGGCGG CTGCTGGCCG CGGGCGGCTT CCTGATCGGG ACCTTCCTGC TGATCCAGGC CCAGTCGGCG GGTCAGCTGC TGGCCACCGG CGCGGCTCTG GCCTTTGCGC TGCCCTTCTT CCTTGGGCGC TGGCTCAGCT TTGCCCAGCG CATCCTGCTC GCGGGCTTCA CCGTCGGGCT GGGGATCGTG GTGGCCATCC TGCTCGTCGC CATGCAGGAA GAGGTCATGG CGCTGATCCT CGAGACCACC GGCAAGGACG CGACCCTCAC CGGCCGCACC GAACTGTGGG CGCTGGCCTT CCGCGAGATC GCGCAGCAAC CCTTCCTCGG GGTCGGCTAT CAGGCCTACT GGGTGCCCGG GAACCCGGGC GCCGAGGCCA TGTGGAAAGA GTTCGGCATC AGCGGCAAGC GCGGCTTCCA CTTCCACAAC ACCTTCATCT CGAACGCGGT CGAGATCGGG ATCATCGGGG TCGCCATGCA GGCGGTCGCG ATCTTCGGGG CGCTGGCGCT GGCCACGATC TGGGCCTTCA AGGAGCCGCG GGCGGAGTCC ATCTTCCTGA CCGCCCTGAT GATGCGGAGC ACCGTGCTCA GCATGTCCGA AGTCGTGGGC TACCTGCAGT TCGACCTCGC GACCCTGATG CTGGTCGCGG CCCTCGTCTA TGTGCTTCGC AACCAGCGCG AGCGTCGGCA GCAGCGGATG CCCCTGCGCC AACGCGGCGC CGTTCGGCCA GTGAACGACG CGGCCGATCC GTCCCCGCCG CATCCGGTCT AG
|
Protein sequence | MTAAPLRPHR HDGMIIDVCP TTVLAFLTIL CLLLVQWIGS MAAAGFLASG CLLVVRRPQT TLMELRRYWM IFAIAAWCLF TVLWSQYASL SLRYGIQLCV TFAIAVAIAS RLSPIVFLRI LFSAHLIAAV LSLVFGKVRA DGLGWLGIFG SKNAFSLPMS TLMLCAFAIM LDRNQSRMWR LLAAGGFLIG TFLLIQAQSA GQLLATGAAL AFALPFFLGR WLSFAQRILL AGFTVGLGIV VAILLVAMQE EVMALILETT GKDATLTGRT ELWALAFREI AQQPFLGVGY QAYWVPGNPG AEAMWKEFGI SGKRGFHFHN TFISNAVEIG IIGVAMQAVA IFGALALATI WAFKEPRAES IFLTALMMRS TVLSMSEVVG YLQFDLATLM LVAALVYVLR NQRERRQQRM PLRQRGAVRP VNDAADPSPP HPV
|
| |