| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rsph17025_1882 |
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| Symbol | |
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| ID | 5084307 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Rhodobacter sphaeroides ATCC 17025 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009428 |
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| Strand | - |
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| Start bp | 1931682 |
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| End bp | 1932854 |
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| Gene Length | 1173 bp |
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| Protein Length | 390 aa |
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| Translation table | 11 |
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| GC content | 72% |
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| IMG OID | 640483443 |
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| Product | histone deacetylase superfamily protein |
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| Protein accession | YP_001168078 |
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| Protein GI | 146277919 |
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| COG category | [B] Chromatin structure and dynamics
[Q] Secondary metabolites biosynthesis, transport and catabolism |
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| COG ID | [COG0123] Deacetylases, including yeast histone deacetylase and acetoin utilization protein |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 12 |
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| Plasmid unclonability p-value | 0.70694 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 25 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | GTGATCCACG CACCGGGACA GGCGGAGACG GCCCCGCCCG AGGTGTGCGG CCCGGCCGCG
CCCCCATCGC CTCTCGATAA GCCCATCTTC ATCGGGTCCG AGATCTACCG CGGCTCGAGC
TACGGGCTGC GCCATCCGCT GCGCGTTCCG CGCGTCTCGA CGGTGATGGA CCTTGCGCGT
GCGATGGGCT GGCTTTCGCC CGCCAACTAC CGCGGCGCGC CGCGCGCCAA GCCGGCCGCG
CTGCACATCT GGCACGATCC CGACTATGTC GCGGCGCTTC AGGCCGCCGA GGCGGGGCTT
GCGGCCCCCG GCACGCTGGC CGCGTTCGGA CTCGGCACGC TGTCGAATCC CGTCTTTCCC
GAGATGTTCC GCAGGCCCGC CACGGGGGCA GGGGGCGTCA TGCTGGCGGC CGAGCTTCTG
CGGACGGGCG GCTGCGTGCA TGTCCCCGGC GGAGGCACGC ACCACGGCCT GCCGGATCGG
GTGAACGGCT TCTGCTATCT CAACGATCCG GTGTTGGGGA TGCTGGTCCT GCGGCGCGCC
GGCCTGCGGC GCATCGCCTA TGTCGATATC GACGCCCATC ATCCCGACGG GGTGGAACAT
GCCTTTGCGG GCGATCCCGA GGCGCTGCTG ATCTCGGTTC ACGAGGAGGG GCGCTGGCCC
TTCACCGGCA CGCTTGATGC GGACGGGGGC GGGAACTGCT TCAACCTGCC GGTGCCGCGC
GGCTTCAACG ACACCGAGAT GCGCGCCGCG CTGGAGGGGC TGATCCTGCC CCGGCTTGCG
GCCTTCCGCC CCGAGGCGCT CGTGCTGCAA TGCGGAGCCG ACGCGCTGGA CGAGGATCCG
CTGTCGCGGC TGTCGCTGTC GAACAATGCG CATTTCGAGG TGGTGACGGC CCTGCGCCCC
TTGGCGCCGC GTTTCCTTGT CCTTGGCGGC GGGGGCTACA ACCCCTGGTC GGTGGGCCGT
TGCTGGGCAG GCGTCTGGGC CGTCCTGTCC GGCCACGAGA TCCCGGACCG CCTGCCCGCG
TCCGCCCGCT CCGTGCTGGA AGCACTCGAC TGGGGCGGCG GCGGGCGCCC GCCGCCCGCG
GCCGCGATGA TCGAGACGTT GCGCGACCCG CCCCGCGAAG GTCCGGTGCG GCCCGAGGTC
CGGGAGCGGC TCGCCCGTCT GGCGCGCCGA TGA
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| Protein sequence | MIHAPGQAET APPEVCGPAA PPSPLDKPIF IGSEIYRGSS YGLRHPLRVP RVSTVMDLAR
AMGWLSPANY RGAPRAKPAA LHIWHDPDYV AALQAAEAGL AAPGTLAAFG LGTLSNPVFP
EMFRRPATGA GGVMLAAELL RTGGCVHVPG GGTHHGLPDR VNGFCYLNDP VLGMLVLRRA
GLRRIAYVDI DAHHPDGVEH AFAGDPEALL ISVHEEGRWP FTGTLDADGG GNCFNLPVPR
GFNDTEMRAA LEGLILPRLA AFRPEALVLQ CGADALDEDP LSRLSLSNNA HFEVVTALRP
LAPRFLVLGG GGYNPWSVGR CWAGVWAVLS GHEIPDRLPA SARSVLEALD WGGGGRPPPA
AAMIETLRDP PREGPVRPEV RERLARLARR
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