| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rsph17025_0578 |
|---|
| Symbol | |
|---|
| ID | 5082883 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Rhodobacter sphaeroides ATCC 17025 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009428 |
|---|
| Strand | + |
|---|
| Start bp | 580308 |
|---|
| End bp | 581225 |
|---|
| Gene Length | 918 bp |
|---|
| Protein Length | 305 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 69% |
|---|
| IMG OID | 640482133 |
|---|
| Product | hypothetical protein |
|---|
| Protein accession | YP_001166789 |
|---|
| Protein GI | 146276630 |
|---|
| COG category | [R] General function prediction only |
|---|
| COG ID | [COG5006] Predicted permease, DMT superfamily |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 10 |
|---|
| Plasmid unclonability p-value | 0.242573 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 24 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGAGCGCCT TTCCCGCAGA TGCGAGCCGG ACCCGCACGC TGGAAGGCGT GCTCTGGATG
CTGGCCTCCG GCCTCAGCTT CGTGGCGGTG ACGGGCATCG TTCGCTATCT GGGCACCGAC
ATTCCGGCGG CACAGGGGGC GTTCCTCCGC TTCGCCTTCG GTGTGCTGTT CCTGCTGCCG
ACGCTGATCC CGGTGCTGCG GGGCGGCTTT CCGCCCGGCG CGCTGAAGGT CTATTCCCTG
CGCGGCCTCG TGCACACCTT CGCCGTGATC TGCTGGTTCT ACGCCATGGC CCGCATTCCG
GTCGCCGAGG TGACGGCCAT CGGCTACCTG AACCCGGTTC TGGTGACGCT GGGGGCGGCG
CTCTTCTTTG CCGAGCGGCT GGCGCTGCGG CGGGTTCTGG CGGTGGCGGT GGCGCTGGTG
GGGGCGCTGA TCGTGCTCCG GCCCGGCCTG CGCGAACTGT CTTCGGGGCA CCTGTCGCAA
CTCGGCGCGG CCTCGTTCTT CGCCGTCAGC TACCTGCTGG CCCGCAGGCT GTCGGACGTG
GCGGGGGCGG GGGCGATCGT GGCGATGCTG TCGCTGACGG TGACGGTGGG CCTGCTGCCC
TTTGCGCTGC TCGTCTGGGT GCCGGTGGGC GCGACGCAGC TTCTGTGGCT TGCGCTCGTG
GCCGTGTTCG CCACGCTCGG CCATTACTGC ATGACCCGCG CCTTTGCCGC GGCCCCGCTG
ACGGTGACGC AACCCGTCAC CTTCCTGCAA CTTGTCTGGG CCACGTTGCT CGGGGCGCTG
GCCTTCGGGG AACGCATCGA CCCCTTCGTG CTTCTGGGAG GCGGGATCAT CATCTCTGCC
ATCACCTACA TCACCTGGCG CGAGTCGGTG CTGAAGCGGC GGGCGAGTGC ATCCATTGCG
AAAGAAGCCT TGGGTTGA
|
|---|
| Protein sequence | MSAFPADASR TRTLEGVLWM LASGLSFVAV TGIVRYLGTD IPAAQGAFLR FAFGVLFLLP
TLIPVLRGGF PPGALKVYSL RGLVHTFAVI CWFYAMARIP VAEVTAIGYL NPVLVTLGAA
LFFAERLALR RVLAVAVALV GALIVLRPGL RELSSGHLSQ LGAASFFAVS YLLARRLSDV
AGAGAIVAML SLTVTVGLLP FALLVWVPVG ATQLLWLALV AVFATLGHYC MTRAFAAAPL
TVTQPVTFLQ LVWATLLGAL AFGERIDPFV LLGGGIIISA ITYITWRESV LKRRASASIA
KEALG
|
|---|
| |