Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Rsph17025_0424 |
Symbol | |
ID | 5082512 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Rhodobacter sphaeroides ATCC 17025 |
Kingdom | Bacteria |
Replicon accession | NC_009428 |
Strand | + |
Start bp | 419623 |
End bp | 420495 |
Gene Length | 873 bp |
Protein Length | 290 aa |
Translation table | 11 |
GC content | 62% |
IMG OID | 640481976 |
Product | hypothetical protein |
Protein accession | YP_001166635 |
Protein GI | 146276476 |
COG category | [M] Cell wall/membrane/envelope biogenesis |
COG ID | [COG3137] Putative salt-induced outer membrane protein |
TIGRFAM ID | |
| ![](https://exploration.weizmann.ac.il/pandatox/images_new/ic_cp.jpg)
![](https://exploration.weizmann.ac.il/pandatox/images_new/ic_hh.jpg)
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Plasmid Coverage information |
Num covering plasmid clones | 13 |
Plasmid unclonability p-value | 0.907602 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 14 |
Fosmid unclonability p-value | 0.0687278 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAAAGAGA ACATTCGCCT GACCGGTCTC ACGGCGTTGG CCCTGCTGAT CGGCTCCACC GCGGTTCATG CCCAGGTCGG CACGATCACC GGCACGCGGC AACTGGAGGA GCGGCTCGAG GATATCGAGG AAGACATTCA GGAGGATCTC GAAGAGGCCG AGGACCCCTA TCGTTTCGGA ACCCCGGAGT TCCGTCCCGG CTTCTCCGGC AGCGCCTCGA TCGGCTACAG CGGCTCGGAC GGCAACACCG ATGAGCAGAA CCTTACCATC GGCGCCCGCC TGCGTCACGC GCAGGGTCCG TTCGTTCAGA ACTTCGGCCT CGTGCTCGAC TATGCCGAGA CCGACGGAAA CTCGGACCAG GAAGACATCT TCATGGTCTA TGAGGGCAAC TACTACTTCA ACGAACAGCT CTACGGCTTC GTGTTGGGCC GGACGGAGTT CAACGGACTC GCTGACGAAC TGGACGTGAC AGGTGATCTT GCCGATGTGC CGCTCGCGGA ACGCGTCAAG ACCGACGGAT TCATCGGCTT CGGCCCGGGC TACCGCGTCG TGAACCGCCC CGACATGACC TGGCGGGTCC AGGCCGGTAT CGGCGTCAGC TACCTCGAGT TCGGAGACGG TCGCGACGAG ACCGAGACGG GCTACATCGC CTCGTCCCGC TTCTACTGGC GCTTCAACGA GAACGTGTTC CTGACGAACG ACACTGACGT TCTCGAGTCG GACGAAGCCC TTCGGGTCAA CAACGACTTC GGCGTGAACT TCCGGATGAC CGACGCCTTC TCGACCCGGG TGAGCTATCT CACCGACTAC AACGAGGCGC GCGCGATCCG CACCGACAAC AAGCTCGGCG TGTCGCTGGT CTATGGTTTC TGA
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Protein sequence | MKENIRLTGL TALALLIGST AVHAQVGTIT GTRQLEERLE DIEEDIQEDL EEAEDPYRFG TPEFRPGFSG SASIGYSGSD GNTDEQNLTI GARLRHAQGP FVQNFGLVLD YAETDGNSDQ EDIFMVYEGN YYFNEQLYGF VLGRTEFNGL ADELDVTGDL ADVPLAERVK TDGFIGFGPG YRVVNRPDMT WRVQAGIGVS YLEFGDGRDE TETGYIASSR FYWRFNENVF LTNDTDVLES DEALRVNNDF GVNFRMTDAF STRVSYLTDY NEARAIRTDN KLGVSLVYGF
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