Gene Rsph17025_0424 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRsph17025_0424 
Symbol 
ID5082512 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRhodobacter sphaeroides ATCC 17025 
KingdomBacteria 
Replicon accessionNC_009428 
Strand
Start bp419623 
End bp420495 
Gene Length873 bp 
Protein Length290 aa 
Translation table11 
GC content62% 
IMG OID640481976 
Producthypothetical protein 
Protein accessionYP_001166635 
Protein GI146276476 
COG category[M] Cell wall/membrane/envelope biogenesis 
COG ID[COG3137] Putative salt-induced outer membrane protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones13 
Plasmid unclonability p-value0.907602 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones14 
Fosmid unclonability p-value0.0687278 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAAAGAGA ACATTCGCCT GACCGGTCTC ACGGCGTTGG CCCTGCTGAT CGGCTCCACC 
GCGGTTCATG CCCAGGTCGG CACGATCACC GGCACGCGGC AACTGGAGGA GCGGCTCGAG
GATATCGAGG AAGACATTCA GGAGGATCTC GAAGAGGCCG AGGACCCCTA TCGTTTCGGA
ACCCCGGAGT TCCGTCCCGG CTTCTCCGGC AGCGCCTCGA TCGGCTACAG CGGCTCGGAC
GGCAACACCG ATGAGCAGAA CCTTACCATC GGCGCCCGCC TGCGTCACGC GCAGGGTCCG
TTCGTTCAGA ACTTCGGCCT CGTGCTCGAC TATGCCGAGA CCGACGGAAA CTCGGACCAG
GAAGACATCT TCATGGTCTA TGAGGGCAAC TACTACTTCA ACGAACAGCT CTACGGCTTC
GTGTTGGGCC GGACGGAGTT CAACGGACTC GCTGACGAAC TGGACGTGAC AGGTGATCTT
GCCGATGTGC CGCTCGCGGA ACGCGTCAAG ACCGACGGAT TCATCGGCTT CGGCCCGGGC
TACCGCGTCG TGAACCGCCC CGACATGACC TGGCGGGTCC AGGCCGGTAT CGGCGTCAGC
TACCTCGAGT TCGGAGACGG TCGCGACGAG ACCGAGACGG GCTACATCGC CTCGTCCCGC
TTCTACTGGC GCTTCAACGA GAACGTGTTC CTGACGAACG ACACTGACGT TCTCGAGTCG
GACGAAGCCC TTCGGGTCAA CAACGACTTC GGCGTGAACT TCCGGATGAC CGACGCCTTC
TCGACCCGGG TGAGCTATCT CACCGACTAC AACGAGGCGC GCGCGATCCG CACCGACAAC
AAGCTCGGCG TGTCGCTGGT CTATGGTTTC TGA
 
Protein sequence
MKENIRLTGL TALALLIGST AVHAQVGTIT GTRQLEERLE DIEEDIQEDL EEAEDPYRFG 
TPEFRPGFSG SASIGYSGSD GNTDEQNLTI GARLRHAQGP FVQNFGLVLD YAETDGNSDQ
EDIFMVYEGN YYFNEQLYGF VLGRTEFNGL ADELDVTGDL ADVPLAERVK TDGFIGFGPG
YRVVNRPDMT WRVQAGIGVS YLEFGDGRDE TETGYIASSR FYWRFNENVF LTNDTDVLES
DEALRVNNDF GVNFRMTDAF STRVSYLTDY NEARAIRTDN KLGVSLVYGF