Gene Rsph17025_0233 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRsph17025_0233 
Symbol 
ID5083781 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRhodobacter sphaeroides ATCC 17025 
KingdomBacteria 
Replicon accessionNC_009428 
Strand
Start bp226132 
End bp227397 
Gene Length1266 bp 
Protein Length421 aa 
Translation table11 
GC content72% 
IMG OID640481788 
ProductROK family protein 
Protein accessionYP_001166448 
Protein GI146276289 
COG category[G] Carbohydrate transport and metabolism
[K] Transcription 
COG ID[COG1940] Transcriptional regulator/sugar kinase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones17 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones18 
Fosmid unclonability p-value0.585824 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACAGCCG GGAGGCCCGC GGTGCCGGGC AGGGAGATGA CCGTGAGACA GGGACAGGAG 
ACCGCAGAGC GCCCGGCCGC AGCCGAACCC GGGCTGCGCG GCTCGAACCA GAGCGGGATG
CGCGCCCGCA ACGAACGCCT CGTGCTCTCG CTCGTGCGGC GCGCGGGGGC GCTGGCCAAG
TCCGACATCG CGCGGATGAC GGGCCTGTCG GCCCAGACCG TCTCGGTCAT CATGCGCGAG
CTTGAGCGCG ACGGCCTCCT GTGCCGGGGA GAGCCGATCC GCGGCCGCAT CGGCCAGCCC
TCGGTTCCCA TGTCGCTCGC GGCCGAGGGC GCCTACTTTC TCGGCCTCAA GATCGGACGG
CGCTCGGCGG AACTCGTGCT GATCGACTTC CTCGGCCAGC CGGTCGCGGC GCGGCGCCGG
ATCTATTCCT ACCCGACGCC GGATGCGGTC GTGGACTTCA CCGCCGAGGC GCTGCCCCTG
CTGACCGGAA GCCTGCCGCC CGAGGCGCGC GCGCGTGTGG GGGGCATGGG CATCGCCATG
CCGTTCCAGC TGTGGAACTG GGTGCAGTAT GTCGGCGCCC CCCAGTCCGA AATGGACGCC
TGGCGCGAGC GCGACATCCA GACCGAACTG GCCGCCCTCA CCGGGCTGCC GGTCCATCTG
CGCAACGATG CCACGGCCGC CTGCGGCGCC GAACTGGTCT TCGGCACCGG CGAGCGCCCG
AAGGACTTCC TCTATTTCTA CTTTGCCTAT TTCATCGGCG GCGGGCTGGT CCTGAACGGG
CACCTCTATG CCGGCCGCAC CGGCAATGCG GCCGGCGTCG GGCCGATGCC GGTGCCCGAC
CGCTCGGGCC GGATGCGTCG GCTGCTGAAC GTGGCCTCCA TGTCCGTCCT TGCCGAGGCG
ATGGAACAGG CGGGCGAAGA CCCGGCCGCC CTGTGGGAGA ACCCCGACCA CTGGGAGGTG
AGCGCGCCCG TCCTGTCCGA CTGGCTCGAC GGCGCGGCGG CGGGGCTTGC CTCGGCGATT
CTCTCGGCCT CGGCCCTGGT CGAGATGGAG ACGGTGATGA TCGACGGCTG GATGCCGCCG
GAGATCCGGG CCGAGATGGT GCGCCGGACC CACGCCGCGC TGCACCGGCT GGACCTGTCG
GGAATCGAGC CCCCGCAGAT CCGCGAGGGC ACCGTCGGAG CCCAGGCGCG GGCCCTCGGG
GCGGCCGCCA TCCCGCTTTC GCAGCGTTAC CTTGTCGAGG CCTGGGGCGC CGCCGCCGAC
GGCTGA
 
Protein sequence
MTAGRPAVPG REMTVRQGQE TAERPAAAEP GLRGSNQSGM RARNERLVLS LVRRAGALAK 
SDIARMTGLS AQTVSVIMRE LERDGLLCRG EPIRGRIGQP SVPMSLAAEG AYFLGLKIGR
RSAELVLIDF LGQPVAARRR IYSYPTPDAV VDFTAEALPL LTGSLPPEAR ARVGGMGIAM
PFQLWNWVQY VGAPQSEMDA WRERDIQTEL AALTGLPVHL RNDATAACGA ELVFGTGERP
KDFLYFYFAY FIGGGLVLNG HLYAGRTGNA AGVGPMPVPD RSGRMRRLLN VASMSVLAEA
MEQAGEDPAA LWENPDHWEV SAPVLSDWLD GAAAGLASAI LSASALVEME TVMIDGWMPP
EIRAEMVRRT HAALHRLDLS GIEPPQIREG TVGAQARALG AAAIPLSQRY LVEAWGAAAD
G