Gene Rsph17025_0127 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRsph17025_0127 
Symbol 
ID5082535 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRhodobacter sphaeroides ATCC 17025 
KingdomBacteria 
Replicon accessionNC_009428 
Strand
Start bp131258 
End bp132427 
Gene Length1170 bp 
Protein Length389 aa 
Translation table11 
GC content66% 
IMG OID640481682 
ProductATPase-like protein 
Protein accessionYP_001166343 
Protein GI146276184 
COG category[L] Replication, recombination and repair 
COG ID[COG3598] RecA-family ATPase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones17 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones30 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACGGACG ATCCATTTGA CGGCATTGAA CCGGAAACGC TGCCGAACGT CACGAGGCTG 
GATGAGTTCC GCAACCGGCC GCGACCAACT GGAAAGGCGG CACCGTCCCC CAAGCGAGCG
AGCCGCTTCT TCTCGGCCGC CACGCTCGAA GGGAAGCCCG TGCCCCCTCG CCAGTGGCTG
GTTGACGACC TCGTGCCGGC GCGCAACGTG ACGTTGCTCT ACGGTGACGG CGGCGTGGGG
AAGTCGCTGG TGGCCCTGCA ACTAGCGGCA GCGGTTGCCC TCGGGCGCCC ATGGCTCGGA
CGGCCTACCG TCTCCGGCCA TGCCATCTTC ATGTCGGCCG AAGACGATGC CGACGAACTG
CACCGCCGTC TGCAGGACAT CACCCAGGCC GAGGGCGTGA CCCTCGCGGA TCTCGACCGC
CTGACCATCC GAAGCCTTGC GGGCGAGGAC GCGCTTCTTG CCATCCTGGA CCCGCGCAGC
GGCGTCCTGC ACCCGTCCGA CCTCTACCGC GAGCTGGACG CCTATCTTGA GGCCGAACAG
CCGGCTGTGG CAGTTCTGGA CACCTTGGCA GACCTGTTCC CCGGCAACGA GATCATCCGC
GCTCAGGCGC GGCAGTTCAT CGGGATGATG CGCGCCCTTG CGATCCGTCA CGACTGCACC
GTGGTGCTGC TGGCTCACCC CTCCCTGTCG GGCCTGCAAA GTGGCTCTGG GACTTCGGGA
AGCACCGCGT GGAACAACTC TGTCCGGTCC CGCCTCTACC TTGAGCGCGT GATGCGGGAC
GACCGAGAGG ACAATCCCGA TGCGCGGGTG CTCACCAACA AGAAACAGAA CTATGGCCGG
ACAGGTGACG AGATCGCCTT GACATGGAGG GATGGCGTCT TCGTCGCGGA TGCGCCCGAA
CCCGGCCTTG ACCGCACGGC ACGCCGCAGC AAGGCCATGC GCAAGTTCAT GGAGCTGCTG
CGCAAGCTCG ACCAGGAGGG CCGGGACGTG AACGCCCGCA GCGGCCCGAA CTACGCCCCG
AGCGTGTTTG CGGATCACCC CGACGCTGAA GGCATCACCA AGGTTGCGTT TCGCGAGGCC
ATGAACCTTC TGTTCTCGGA AGGAGCAATC CGCAACGCGC AGATCAAGCG CGACGGCAAG
CTGGCGACCG TCATTCAGGA GGCCGAGTGA
 
Protein sequence
MTDDPFDGIE PETLPNVTRL DEFRNRPRPT GKAAPSPKRA SRFFSAATLE GKPVPPRQWL 
VDDLVPARNV TLLYGDGGVG KSLVALQLAA AVALGRPWLG RPTVSGHAIF MSAEDDADEL
HRRLQDITQA EGVTLADLDR LTIRSLAGED ALLAILDPRS GVLHPSDLYR ELDAYLEAEQ
PAVAVLDTLA DLFPGNEIIR AQARQFIGMM RALAIRHDCT VVLLAHPSLS GLQSGSGTSG
STAWNNSVRS RLYLERVMRD DREDNPDARV LTNKKQNYGR TGDEIALTWR DGVFVADAPE
PGLDRTARRS KAMRKFMELL RKLDQEGRDV NARSGPNYAP SVFADHPDAE GITKVAFREA
MNLLFSEGAI RNAQIKRDGK LATVIQEAE