| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rru_A2605 |
|---|
| Symbol | |
|---|
| ID | 3836040 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Rhodospirillum rubrum ATCC 11170 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_007643 |
|---|
| Strand | - |
|---|
| Start bp | 3029883 |
|---|
| End bp | 3030449 |
|---|
| Gene Length | 567 bp |
|---|
| Protein Length | 188 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 66% |
|---|
| IMG OID | 637826711 |
|---|
| Product | phosphoheptose isomerase |
|---|
| Protein accession | YP_427689 |
|---|
| Protein GI | 83593937 |
|---|
| COG category | [G] Carbohydrate transport and metabolism |
|---|
| COG ID | [COG0279] Phosphoheptose isomerase |
|---|
| TIGRFAM ID | [TIGR00441] phosphoheptose isomerase |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 13 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | GTGGAAGACG AGATCAGGGC TTTTTGTCAG ACCGCCGCCG ATTGTTTCAT CCGCCTGGGG
GACTGCGCGC CGGCCATCGC CGAGGCGGCG GGGGTGGTGA CGGCCAGCCT GCGCGCCGGC
GGCAAGGTGA TGTTCTGCGG CAATGGCGGG TCGGCCGCCG ATGCCCAGCA TCTGGCAGCG
GAACTGGAGG GCCGCTATCT GAAGGAACGG GCGCCGTTGC CCGGGATGGC GCTGACCACC
AACACCTCGA CCCTTACCGC CGTCGGCAAT GATTACGGCT TCGATCATAT CTTTTCGCGT
CAAGTCAGCG CCCATGGCCG TCCCGGCGAT GTGCTGGTCG CCCTGTCGAC CAGCGGCAAC
AGCGCCAATG TGCTGAAGGC GATCGAGGCG GCGCGGGAAA AGGGCGTTTC GGTCATCGGT
CTGACCGGGG CGGGGGGCGG CAAGATGGCC GAGGTCTGCG ATCTGTGCAT CAGGGTTCCC
TCGACGCAGA CGCCGCAGAT CCAGCAGATG CATATCGCCG TTGGCCACCT GCTGTGCGGT
TTGGTCGAGG ACGCCTTATG CTCGTGA
|
|---|
| Protein sequence | MEDEIRAFCQ TAADCFIRLG DCAPAIAEAA GVVTASLRAG GKVMFCGNGG SAADAQHLAA
ELEGRYLKER APLPGMALTT NTSTLTAVGN DYGFDHIFSR QVSAHGRPGD VLVALSTSGN
SANVLKAIEA AREKGVSVIG LTGAGGGKMA EVCDLCIRVP STQTPQIQQM HIAVGHLLCG
LVEDALCS
|
|---|
| |