Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Rru_A2410 |
Symbol | |
ID | 3835844 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Rhodospirillum rubrum ATCC 11170 |
Kingdom | Bacteria |
Replicon accession | NC_007643 |
Strand | - |
Start bp | 2810164 |
End bp | 2811456 |
Gene Length | 1293 bp |
Protein Length | 430 aa |
Translation table | 11 |
GC content | 68% |
IMG OID | 637826518 |
Product | homoserine dehydrogenase |
Protein accession | YP_427497 |
Protein GI | 83593745 |
COG category | [E] Amino acid transport and metabolism |
COG ID | [COG0460] Homoserine dehydrogenase |
TIGRFAM ID | |
| ![](https://exploration.weizmann.ac.il/pandatox/images_new/ic_cp.jpg)
![](https://exploration.weizmann.ac.il/pandatox/images_new/ic_hh.jpg)
|
Plasmid Coverage information |
Num covering plasmid clones | 8 |
Plasmid unclonability p-value | 0.615883 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
| |
Sequence |
Gene sequence | ATGAATGATC CTTTGAAAGT CGCCGTCGCC GGCCTGGGAA CGGTCGGCGC CGGGGTGGTG AAGCTGCTGG CCGACCACAA GGACCTGCTG GCCGCCCGCG CCGGCCGGCC GGTGGTGGTC AGCGCCGTTT CGGCCCGCTC GCGCACGCGC GATCGCGGGG TCGATCTGTC GTCCTATGCG TGGTTCGATG ATCCCGTCGC CCTGGTCCGC GAGGCCAAGG CCGATGTGGT GGTCGAACTG ATCGGCGGAT CGGACGGCCC GGCCAAGGCC GTCTGCGAGA CCGCCCTTGA TCTTGGCCGG CCGGTGGTGA CCGCCAACAA GGCGTTGCTC GCCCACCATG GGCTGGCCCT GGCCGCCCGC GCCGAGGCGA CGGGGGCGGG GCTGTGGTTC GAAGCCGCCG TGGCCGGCGG CATTCCGATC ATCAAGGCCC TGCGCGAAGG CTTGGCCGCC AACCGGATCG ACGCCCTTCA CGGCATCCTC AACGGTACCT GCAATTATAT CCTGACGACC ATGCGCGAAA GCGGGCGGGA TTTCGCCGAC GTGCTAGCCG AGGCCCAGGC TTTGGGCTAT GCCGAGGCCG ATCCCGGCTT TGATATCGAC GGCATCGACG CCGCCCATAA GCTGGCCCTT CTCGCCAGTC TCGCCTTCCA TGTTCCGGTC GATCTGGGTG GGGTGAGCAT TCAGGGCATC CGCCATATCT CGTCGCTCGA TATCCGCTTC GCCGATGAAC TGGGCTATCG CATCAAATTG CTGGCGATGG CCCGGCGCAC CGCCGAGGGC GTGGAACAGC GGGTGGCGCC GGTGATGGTG CCCCTTGACG CGCCGCTCGC CCATGTCGAG GGCGTCAATA ACGCCGTGGT CACCGAGGGC GACTTCGTGG GCCGCAGCGT GTTCCAGGGG CGCGGCGCCG GGGCCGGTCC GACGGCTTCG GCCGTGGTCG CCGATCTGAT CGATCTGGCG CGCGGCCATA AGGTTCCGGT CTTTGGCGTG CCCAGCTCGG CGCTGAGCGT TCTGCCGCGC GCCGAGCCCG AGGATCATGT CGGGCGCTAT TACGTCCGAC TGATGGTCGT TGACCGGCCG GGGGTTTTCG CCGAGGTGGC GGCGGCGTTG CGCGATGAAC AGGTCTCCAT GGAATCCGTT CTTCAACGCG CCCGCGATCC CGGCGAGACG GTGCCGGTGG TCATGACCCT TCATGACACC GGCGAGGCGG CGATGACCCG GGCCCTGGCC CGCATCGGGG CGATCGACGC CATGGTCGAG CCGCCCCGCG TCATCCGCAT CGAACAGTTC TAG
|
Protein sequence | MNDPLKVAVA GLGTVGAGVV KLLADHKDLL AARAGRPVVV SAVSARSRTR DRGVDLSSYA WFDDPVALVR EAKADVVVEL IGGSDGPAKA VCETALDLGR PVVTANKALL AHHGLALAAR AEATGAGLWF EAAVAGGIPI IKALREGLAA NRIDALHGIL NGTCNYILTT MRESGRDFAD VLAEAQALGY AEADPGFDID GIDAAHKLAL LASLAFHVPV DLGGVSIQGI RHISSLDIRF ADELGYRIKL LAMARRTAEG VEQRVAPVMV PLDAPLAHVE GVNNAVVTEG DFVGRSVFQG RGAGAGPTAS AVVADLIDLA RGHKVPVFGV PSSALSVLPR AEPEDHVGRY YVRLMVVDRP GVFAEVAAAL RDEQVSMESV LQRARDPGET VPVVMTLHDT GEAAMTRALA RIGAIDAMVE PPRVIRIEQF
|
| |