| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rru_A2408 |
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| Symbol | |
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| ID | 3835842 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Rhodospirillum rubrum ATCC 11170 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007643 |
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| Strand | - |
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| Start bp | 2806942 |
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| End bp | 2808762 |
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| Gene Length | 1821 bp |
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| Protein Length | 606 aa |
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| Translation table | 11 |
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| GC content | 69% |
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| IMG OID | 637826516 |
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| Product | RecJ exonuclease |
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| Protein accession | YP_427495 |
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| Protein GI | 83593743 |
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| COG category | [L] Replication, recombination and repair |
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| COG ID | [COG0608] Single-stranded DNA-specific exonuclease |
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| TIGRFAM ID | [TIGR00644] single-stranded-DNA-specific exonuclease RecJ |
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Plasmid Coverage information |
| Num covering plasmid clones | 11 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGACCGATA TTCTGACTCC GGCGGCCCCG CCCGCCCTTC CGACCCGCGA TGCCGCATTT
CTCGGGGTCG AGCGTTCGCG CGGCGGCCGG CGATGGGTCT TGCGCCCGGG CGATGAGCGA
CAGGCCTTGG CGATCAGCCA GCGCCTGGGG GTTCCCGAGG TTGTTGGTCG GGTTCTGACC
GGTCGCGGCG TCCAGGTCGA GGAGGCCGAC GGTTTTCTCA CGCCGACGTT GCGCGCCCTG
CTGCCCGATC CCGGCCATCT GCTGGATATG GACAAGGCGG TGGCCCGCCT GAGCAAGGCG
GTGCGCGACA AGGAGACGAT CGCCATCTTC GGCGATTACG ACGTCGACGG GGCGACCTCG
ACGGCCCTGA TGCACCGCTT CTTCCGCAGC CTGGGCGCCC GGGTGCTGAT CCATATTCCC
GACCGGGTGC TTGAGGGCTA TGGCCCCAAT GCTCCGGCCC TGGAGGCCTT GGCCGCCAAG
GGGGCGCGGG TGGTTCTTAC GGTCGATTGC GGCATCAGCG CCTTTGACGC CCTGCGCGCG
GCCAAGGCGG CGGGGCTTGA TGTCGTTGTT TGCGACCACC ACGAGGCGCG CACCGAACTG
CCCGCCGCCG TCGCCGTGGT CAATCCCAAG CGCCTTGATG AGGCCAGCCC CCATACCCAC
CTCGCCGCCG TTGGCGTGGC CTTCCTGATG GCGGTGGCGA TCAACCGCGA TCTGCGCGAC
AGCGGCTGGT TCGCCGCCGA GCAGCGGCCG CCGCCCGATC TGATGGCCTT GCTCGATCTG
GTGGCGCTTG GCACGGTTTG CGACATGGTG CCGCTGATCG GCGTCAATCG CGCCCTGGTC
CAACAGGGGC TGAAGGTGAT CGCCAAGCGC ACCAATCCCG GCATCGCCGC CCTGGCCGAG
GTGTCGGGCG TGCGCGACCG GGTCGACGCC TTTCATCTGG GATTCATGCT GGGGCCGCGG
GTCAATGCCG GCGGCCGGGT GGGGCAGGCC GGCATGGGCG CGGCCCTGTT GTCGAGCGAG
GATCCGCTGG AATGCCTGGA TTTCGCCCGC CAGCTTGACG CCTTCAATGG CGCGCGCAAG
GAAATCGAGG CGGCGGTCCT GCATCAGGCG ATCGAACAGG TGGAAGCCGC CCCTGCCAAT
GATCTGCCGC TGGTTTTCGC CAGCGGCACC GATTGGCATC CCGGCGTCGT CGGCATCGTC
GCCAGCCGGC TCAAGGAACG CTATGGCTTG CCGGCCTGCG CCGTCGCCCT GGATGGCGGA
CTGGCCAAGG GGTCGGGCCG CTCGGTCGGC GGCGTCGATC TTGGCCGGGT GGTGATCGCC
GCCCGCGAGG CCGGCGTGCT TGAGGCCGGG GGCGGGCACG CCATGGCCGC CGGTTTCAGC
TTGCGCACCG ATCGCCTGGA GGAGTTTCGC CAGTTCCTGG GCGAGCGGCT GAAGGATCAG
GTGGCGGCGC TCGCCCTGGT CGCCTCGCTC GATCTCGATG GGGTTCTCGA TGTGCGCGGC
GCCAATGCCC AATTGGTGCG CGCCCTGTCG CAGGCCGGCC CCTATGGCTC GGGCAATCCC
GAACCGCGCT TCGCCGTCGC CAATGCCCGC GTCGGCAAGG TCGATGTCGT CGGCATGGGC
CATGTCCGCT GTTTCCTCAA CGGTCCCTCG GGGGGCTCGT TGAAGGCGAT GGCTTTCAAG
GCCGCCGATT CCGAAATCGG CCACGCCCTG CTCACCGCCC ATGGCGCCTC GCTGCATGTG
GCGGGAACCC TGCGCCTCGA TAGCTTCCAG GGGCGGGAGA CCGTCGTCCT GGTGGTTGAC
GACGTCGCCC CCTGCTCCTG A
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| Protein sequence | MTDILTPAAP PALPTRDAAF LGVERSRGGR RWVLRPGDER QALAISQRLG VPEVVGRVLT
GRGVQVEEAD GFLTPTLRAL LPDPGHLLDM DKAVARLSKA VRDKETIAIF GDYDVDGATS
TALMHRFFRS LGARVLIHIP DRVLEGYGPN APALEALAAK GARVVLTVDC GISAFDALRA
AKAAGLDVVV CDHHEARTEL PAAVAVVNPK RLDEASPHTH LAAVGVAFLM AVAINRDLRD
SGWFAAEQRP PPDLMALLDL VALGTVCDMV PLIGVNRALV QQGLKVIAKR TNPGIAALAE
VSGVRDRVDA FHLGFMLGPR VNAGGRVGQA GMGAALLSSE DPLECLDFAR QLDAFNGARK
EIEAAVLHQA IEQVEAAPAN DLPLVFASGT DWHPGVVGIV ASRLKERYGL PACAVALDGG
LAKGSGRSVG GVDLGRVVIA AREAGVLEAG GGHAMAAGFS LRTDRLEEFR QFLGERLKDQ
VAALALVASL DLDGVLDVRG ANAQLVRALS QAGPYGSGNP EPRFAVANAR VGKVDVVGMG
HVRCFLNGPS GGSLKAMAFK AADSEIGHAL LTAHGASLHV AGTLRLDSFQ GRETVVLVVD
DVAPCS
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