Gene Rru_A2013 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRru_A2013 
Symbol 
ID3835438 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRhodospirillum rubrum ATCC 11170 
KingdomBacteria 
Replicon accessionNC_007643 
Strand- 
Start bp2327236 
End bp2328216 
Gene Length981 bp 
Protein Length326 aa 
Translation table11 
GC content65% 
IMG OID637826113 
Productbinding-protein dependent transport system inner membrane protein 
Protein accessionYP_427100 
Protein GI83593348 
COG category[E] Amino acid transport and metabolism
[P] Inorganic ion transport and metabolism 
COG ID[COG0601] ABC-type dipeptide/oligopeptide/nickel transport systems, permease components 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones17 
Plasmid unclonability p-value1 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAGCCTTT TCCTGTTCGC CCTGCGCCGG TTGGCGACAA GCATCCCCAG TTTGCTGATC 
ATTCTGGTCG GCGTTTTTCT GCTGTTGCAA CTCGCCCCGG GCGACACGGT CGACGCGCTG 
TTGGCCCAGA TGGGCGGCGG CGATGCCCAG ATCATCGAAA CGCTCCGCCA CTTCTATGGG 
CTTGACGCCC CGGTGGCGGT GCAGTTGGGG CGCTATCTGC TGCGCCTCGT GCAGTTCGAC 
CTGGGCTATT CGGCCATCTA CGGCAAGCCG GTGATCGATG TGATCGTCGA ACGCCTGCCG 
GTCACCTTGC TGCTGATGGG CGCCTCGCTG GTGGTGGCGG TGAGCGGCGG CGTGGCCCTG 
GGCGTTCTGG CGGCGCGGCG GGTCAATAAA TGGCCCGATA CGCTGATCTC CACCCTTGGG 
CTGGTCTTCT ACGCCACGCC GTCGTTCTGG CTGGGGCTGA TGGCCGTGGT CGTCTTCGCC 
GTCAAGCTGG GCTGGCTGCC GCCGGGCGGC TTCGAGGAGG TGGGGGCGGG CTATCAGGGA 
CTGACCCGGG CCCTGGATAT CGCCCGCCAT ATGGCCCTGC CGACGATCAC CCTGTCGCTG 
ATTTTCCTTG CCACCTATCT GCGGATCATG CGCGCCTCGA TGCTCGAGGT CTCCTCGCTC 
GATTTCGTCC GCACGGCGCG GGCCAAGGGG GTGGACGAGA CCAAGATCGT CACCCACCAC 
GTGCTGCGCA ACGCCCTGTT GCCGATGCTG ACCCTGATCG GCCTGAACGC CAGCACCATG 
CTGGGCGGAT CGGTGGTGGT GGAAAGCGTC TTCACCCTGC CGGGCCTCGG CCGGCTGGCT 
TACGAATCGG TGGTGCAGCG CGATCTCAAT ACCCTGCTCG GCATTGTCTT GCTGTCGGCG 
GTTCTGGTGA TCGTCGTCAA TTTCATCGTC GACCTGCTGT ATGCCCGGCT TGATCCGCGC 
ATCCGCGCCA AAGGACACTG A
 
Protein sequence
MSLFLFALRR LATSIPSLLI ILVGVFLLLQ LAPGDTVDAL LAQMGGGDAQ IIETLRHFYG 
LDAPVAVQLG RYLLRLVQFD LGYSAIYGKP VIDVIVERLP VTLLLMGASL VVAVSGGVAL 
GVLAARRVNK WPDTLISTLG LVFYATPSFW LGLMAVVVFA VKLGWLPPGG FEEVGAGYQG 
LTRALDIARH MALPTITLSL IFLATYLRIM RASMLEVSSL DFVRTARAKG VDETKIVTHH 
VLRNALLPML TLIGLNASTM LGGSVVVESV FTLPGLGRLA YESVVQRDLN TLLGIVLLSA 
VLVIVVNFIV DLLYARLDPR IRAKGH