Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Rru_A1647 |
Symbol | |
ID | 3835066 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Rhodospirillum rubrum ATCC 11170 |
Kingdom | Bacteria |
Replicon accession | NC_007643 |
Strand | - |
Start bp | 1935149 |
End bp | 1939624 |
Gene Length | 4476 bp |
Protein Length | 1491 aa |
Translation table | 11 |
GC content | 64% |
IMG OID | 637825741 |
Product | hypothetical protein |
Protein accession | YP_426734 |
Protein GI | 83592982 |
COG category | |
COG ID | |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 0 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
| |
Sequence |
Gene sequence | ATGCCCCTGC CCGACATCGA TTTCAAACAG ATCCGCCTCC GCGGCAATAC TCAGGCTGAT GCCTTTGAAG AACTCTGCTG CCAACTGGCC GCCGACGAAG CATCGACAAT CCGCATTCGC TTCGATCGCA AAGGCCGCGG TGGCGATGCC GGCGTCGAAT GCTACGAGAC GCTGACGGAC GGGTCCGAGA TCGGCTGGCA GGTCAAATTC TACTGGGACA CTGACTCGAT GCTGCGCTCG CTCAGCAAGT CGCTCGACAC AGCGCTGGTT AAGCATCCGA AGATGGCCAA GTTCATCGCT TGCTTTCCCT TCGATCTGGC CGATGCTCGC GTCGAGGATA CGACCACGGC GTTCGACAAA TGGCAGAGCT GGCGCGCAGA TCAGATAACG AAGGAGGCAA CGGCTGGCCG CACAATCGAG ATCGAGCGCT GGGATGCCCA TGCGCTGCGG CAGCGGTTGA CCGCCAGCAA TCCCCGTGCT GCAGGCCGTG TCGCGTTCTG GTTCGACCAG CGCCTGCTCA CGAAAGATTG GTTCGACGCC AAATTCGCCC GCGTAAAGGC CGACCTCGGC GAGCGCTACA ATCCCGTGGT TCATATCGAC CTGCCGATCG GTCGGGCGCT TCGCGCCGTC ACCGGCGACC CCGACCTCTT TGCCGAGCTT GAAACACTCG GGGAAGCGGT GGGCACCGCA GCGGATCTCG CTTTCCCGAT TTCCGGCACC CCGGTCGAGC GCGCGTGCGA CGCCGCTGCG GCGGCGCTAC ATGATGCGGC GCGCTCGCGC ATGGTTCCAG CCTCGAAGCT CCTCGACCTG GTTCACGCTG CAACGGACGC AGCCTTTCAG TTGCATGATG CACTTGGTAC GACAAATGGC GATCAAGATC CAAGTGCCAG CATGGTTGCC GTATCCGATC TCGCGTCGCG ACTTCGTGCT GTCATGATCG AGCTTCGTCA ACCGCACTGG ACATTGCTGA ACAGCCAGTC TCTGCTCATC TCCGGCGCCG CCGGCAGCGG CAAGTCACAC CTTCTCGCCG ACGCCTGCGC GCGCCAGCTC GCGGCCGGGC GTCCGGCGCT TATGGTTCTC GGCGGCACGC TGGTCGACGC GGAGCCTTGG GATCAAATCC TGCGAGCCCT TGATCTTCCC CGCCACCTCG AAGTCGGCCA GTTCCTCGGC GTACTGAACG CCGCGGGCGA GGCTGCCGGT GTCCGTGCCC TCATCGCCAT TGATGCGCTC AACGAGAAAA GCGGCCAGGC AATCTGGCCC GAGCGCCTGA CTGGGCTGCT CCATGACATC AAGGACTATC CGTGGGTCGC GGTGGTCCTT TCCTGCCGGA CGACCTATCT CGAACTCATC GTCCCCGACA CGCTCGACGA CACCAAGCTG CCGCGGATCA CGCATCGCGG CTTCTCAGTC GCGGAAGTGC GCGACTATCT GCGACAGCGC GGCATGACCT TGCCGGAGAC ACCGCTCCAG GTCGCCGAGT TCCGGACTCC TTTGTTTCTG CGCCTCTATT GCGACGCACT CGCCTTTGAG GGGGAAGCCC TGCTCGCACG CCATCTGGGA GGCGTGACCG ATGTCTTCCG TGCCTATGGC GCCACAGTGG CGCGACGTGT CCATCGCCAG CTCAAGATTC CGCCCGGTCG CGACCCGGCA CACCAGGCAC TCGCCGCGCT GGCGCGTGAA ATGGCCGACG CCGGACGCGC TGACGTCACG CTCGACCGCG CCGAGGAGAT CGTCCACGCG GTGCTGCCGG GCCGGTCGAC CGACGACGAC CTGCTGTTCC AGCTCGAGAC CGAGGGCATG CTTGCGGTCG AGTCAGTGAT CGGCCCGTCG CGCGCGAACG CACAGGCGGT GCGGTTCACC TTCGAGCGCA TGGGCGACCA TGCGGTCGTG GCGGATCTGC TCGCGCGCAG CAGCGCCGGC GGCGCTGCGG GACTGTGCAC TCCCGGAACA CCGTTGCATA ACGCGCTCGA CAACCCCGAT AGCTGGATCA TCCCAGGACT GCTCGAAGCT TTGGCCGTCC AACTCCCCGA GAATTTCGGC ATAGAGCTTC CCGACCTGGT TGGCCTGCCG GCCGGATTGA AGCCAGATCA GGCCTTCATG CAGAGCCTTC AGGTTCGGCG TCTCGACGCG ATCACGGCAC GGACGTGGGA GCTGGTCGAT ACCATCGGCG GTGCGACTCT TCGCTACGAC ACGCTCATCG CGCTATCGAC GGAGCCAGGC CACCCCAACA ATGTCCGTCA CCTTGACGCG GAGCTGCGCG CACTGCCGAT GCCCGAGCGC GATGCCCGCT GGTCGGTCCA TCTTGCGGTA ACGCCCGATG CGGCATTCCA CCTGATCGAC TGGGTCTACG CCGCCGACTC CGACGGTATC GCGCCCGAGC GTGCCGAACT CACCGCGATC CAGCTTAGCT GGTTCCTCAC CACCACCCAG CGGAAATTGC GGGACAAGGC GACCAAGGCG CTGGTCCTGC TGTTAGCCGA CCGTGCCGGA CTGGCGCACA AGCTATGGCG GGCCTTTTCC GGTCTTGACG ATCTGTATGT GGTCGAGCGC CTTGCCGCCG CTCTGTTTGG TGCGGCGATG CAGGGCCGCT GGAGCAGCGG CGCGCTGCGC GAGGCTGCCG AAACGCTGCA AGCGGATCTG TTCGCGGGCG GCACGCCGCC CACCAATCTG CTGCTGCGCG ATCATGCCAC TGGGTTGATC GGCTATGCCG AGGCGCACGG CGCGCTGCCC GTGGGGTTCG ATCTCGCATC GACCAGACCG CCCTATTCCA GCCCATGGCC AATCGAGCGG ATCTCGGACG AACAGATGGC CGGGTTCACT GTCGCCTTTG GCGAGGACGG CGAGCGCTTT TGGGACGATA TCGTCAGTTC GCTCAAGGAT GGCGACTTTG CACGCTATGT CCTTGATACG GTGGCGAGGC GGTACAGTCC AGCGCCGCGC GGGACCGATC CGCTGCCGAC CGCCCAGGAT CTGCGCGACC AGTGGCTCGC CGAGTTCGAG GCGAATGCGG GCGAACCGGA ACTGGCCGCC TACACGGCGC TTCAGGCCGA GATCGACGCA ATCAAAGGAT CACGGGCAAG CCCTGTGCCT GCGGATCGCC GCGACGATCT GCGGGCAGCG AAGCAAAGAT TTCGCGAGGC GATCGGCCCA GAACGTTATG AGGATTGGCG GGCTCGAGCT GAAAGCTGGC GCGACGAGGG CATGTACCAA AGCTTCGCAA CGCACGACGG GCCGGCGATG TTCAATCTCG CCTGGGCGCG GCGCTGGGTG ACGTGGCGCG CACACGATCT CGGCTGGTCG GAAGCACTGC ATCAGCCGTT CGACCGCAAA ATCCGCACCG GGCGCAATAG CCATGAGATC GAGCGCGTCG GCAAGAAATA TCAGTGGCTC GCCACGTTTG AGCTGGCGGC GCGGATGGAG GACAATCTCG CAATATTGCC CAACGAAGAG GAAATCGGCC CAAGCCGCCT GCGCAACCTA GATCCATCGA TGCTCCGAGA GCGCGCCGAG GAAGATGGCT GGCGTAGCCC CCGTGAAGGC AGCTTCTGGG CACCCCATCG GCCGAGCATC GAAGCGGCGA CGCCAAGCGA GGCGCTTGCC TGGCTGAATT CCGAAACAGC GATGCTCGAT GATCCGGATA ATGTCGAAGT CGCGGATCCG GACGGCCGTC AATGGCTCGT GCTGACAGGG TTCGAGATCT GGGAGGAAAA CCGGGACGTG GTGCGCTCGG ACGCTTGGCG GAGGATTGGC TGCACGATCG TTCGCGCCTG CGACCGCCAA GCGCTGCTCG ATCGGTTGAG AGGCATCCAT ATGACCGGAA ACCACGACAT GCCGATCGGC GGCGACGGCT ATCACATGCA TCTCGGTGAA CACGCCTGGG CCTGGCCCGA TCGTACCGAC GATGGCTGGA TCGAGGATTG GAGGCCTAAT GGCGGCGACT GGCAGGCACC CGGCGTCGAT GTACGTCCCC CGACCGCCGA ATATATGGCC GAAGCCGGCG GCTACGATTA CTCGATCTCG CAGAATATTA CGCTCAACCT GCCCGCCGGC TGGCTGATGG CAGCGCTCGA CCTTCGCCTC TCTGATGGCC GGTCGATCGA ATTTCGCAAC ACGGCAGGCG ACGTCGTTTT CATCGACCCG TCGATTGATC GGGCAGGACA CAGCGTGGCG CTCGTCGAGC GCAGCGCGTT CCTCGATCTG CTCAAGCGCG AGGGGCTAGT CGCCGTCTGG GCGGTGGCTG GCGAAAAAAG TGTGTTCGGC GTGATCCACA GCGACGGCTT CGGCGGCCGG CGCGCCTTCA CCCGCCTGTT CGTCTCGGAC GGCGGCGCGC TCGAGGCGCT GGACCGGTTC GAAACGTTCG ACAAGCCGTC GCCGCGGCAA CGCGCAATTT TGTTCGCGCA AAGTGTCGAA GGTCTGCCCG ACGATGACGA CGACGAGAGC GATGACGAGG GCAAAGACAT CCGCGTTGAC GCGTGA
|
Protein sequence | MPLPDIDFKQ IRLRGNTQAD AFEELCCQLA ADEASTIRIR FDRKGRGGDA GVECYETLTD GSEIGWQVKF YWDTDSMLRS LSKSLDTALV KHPKMAKFIA CFPFDLADAR VEDTTTAFDK WQSWRADQIT KEATAGRTIE IERWDAHALR QRLTASNPRA AGRVAFWFDQ RLLTKDWFDA KFARVKADLG ERYNPVVHID LPIGRALRAV TGDPDLFAEL ETLGEAVGTA ADLAFPISGT PVERACDAAA AALHDAARSR MVPASKLLDL VHAATDAAFQ LHDALGTTNG DQDPSASMVA VSDLASRLRA VMIELRQPHW TLLNSQSLLI SGAAGSGKSH LLADACARQL AAGRPALMVL GGTLVDAEPW DQILRALDLP RHLEVGQFLG VLNAAGEAAG VRALIAIDAL NEKSGQAIWP ERLTGLLHDI KDYPWVAVVL SCRTTYLELI VPDTLDDTKL PRITHRGFSV AEVRDYLRQR GMTLPETPLQ VAEFRTPLFL RLYCDALAFE GEALLARHLG GVTDVFRAYG ATVARRVHRQ LKIPPGRDPA HQALAALARE MADAGRADVT LDRAEEIVHA VLPGRSTDDD LLFQLETEGM LAVESVIGPS RANAQAVRFT FERMGDHAVV ADLLARSSAG GAAGLCTPGT PLHNALDNPD SWIIPGLLEA LAVQLPENFG IELPDLVGLP AGLKPDQAFM QSLQVRRLDA ITARTWELVD TIGGATLRYD TLIALSTEPG HPNNVRHLDA ELRALPMPER DARWSVHLAV TPDAAFHLID WVYAADSDGI APERAELTAI QLSWFLTTTQ RKLRDKATKA LVLLLADRAG LAHKLWRAFS GLDDLYVVER LAAALFGAAM QGRWSSGALR EAAETLQADL FAGGTPPTNL LLRDHATGLI GYAEAHGALP VGFDLASTRP PYSSPWPIER ISDEQMAGFT VAFGEDGERF WDDIVSSLKD GDFARYVLDT VARRYSPAPR GTDPLPTAQD LRDQWLAEFE ANAGEPELAA YTALQAEIDA IKGSRASPVP ADRRDDLRAA KQRFREAIGP ERYEDWRARA ESWRDEGMYQ SFATHDGPAM FNLAWARRWV TWRAHDLGWS EALHQPFDRK IRTGRNSHEI ERVGKKYQWL ATFELAARME DNLAILPNEE EIGPSRLRNL DPSMLRERAE EDGWRSPREG SFWAPHRPSI EAATPSEALA WLNSETAMLD DPDNVEVADP DGRQWLVLTG FEIWEENRDV VRSDAWRRIG CTIVRACDRQ ALLDRLRGIH MTGNHDMPIG GDGYHMHLGE HAWAWPDRTD DGWIEDWRPN GGDWQAPGVD VRPPTAEYMA EAGGYDYSIS QNITLNLPAG WLMAALDLRL SDGRSIEFRN TAGDVVFIDP SIDRAGHSVA LVERSAFLDL LKREGLVAVW AVAGEKSVFG VIHSDGFGGR RAFTRLFVSD GGALEALDRF ETFDKPSPRQ RAILFAQSVE GLPDDDDDES DDEGKDIRVD A
|
| |