Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Rru_A1461 |
Symbol | |
ID | 3834876 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Rhodospirillum rubrum ATCC 11170 |
Kingdom | Bacteria |
Replicon accession | NC_007643 |
Strand | - |
Start bp | 1727222 |
End bp | 1728892 |
Gene Length | 1671 bp |
Protein Length | 556 aa |
Translation table | 11 |
GC content | 60% |
IMG OID | 637825551 |
Product | 2-isopropylmalate synthase |
Protein accession | YP_426549 |
Protein GI | 161777625 |
COG category | [E] Amino acid transport and metabolism |
COG ID | [COG0119] Isopropylmalate/homocitrate/citramalate synthases |
TIGRFAM ID | [TIGR00970] 2-isopropylmalate synthase, yeast type |
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Plasmid Coverage information |
Num covering plasmid clones | 5 |
Plasmid unclonability p-value | 0.270801 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGTTGACCA ATCCTGAAAT CAAATATCGC CCTTTCGTTT CGCCCATTGA GCTCGACGAT CGCAAATGGC CGTCCAAGCG GCTCACGAAA GCCCCGCGCT GGCTGTCTAC CGATCTGCGA GATGGCAATC AGGCGCTCTC CGATCCGATG GATGTCGAGC GCAAGATGCG TTTTTACGCC ATGCTGCTCG CCATCGGTTT CAAAGAAATC GAGATTGCGT TTCCGTCGGC TTCCCAGACC GAATTTGACT TCGTGCGCGC CCTGATTGGG GGAAACCGGA TACCCGATGA CGTGACGATT CAGGTCCTCA CCCCATCGCG CCAAGACCTG ATCGCTCGCA CCTTCGAATC TCTCGAGGGC GCGCGACAGG TAATCGTTCA TCTCTATAAC GCCACGGCTC CGCTGTTTCG CCGTGTCGTC TTCGGCATGG AGCGCCATGA GATCGTTGAT CTTGCCATCA CCGGTGTCAG CGCGATGCTG GAGGAAAGCC TGAGGCGGCC CGAGACCGAT TGGACCTTCG AATACTCGCC GGAAACCTTC TGCTTCACCG AGCCCGATTT CGCGCTGGAG ATTTGCGAGC GCGTGCTTGA TGTCTGGCAG CCGACGCCCG AGCGCCCGGC GATCCTCAAC CTGCCGGCGA CGGTCGAAGT GGCGACGCCC AACGTCTATG CCGACCAGAT CGAATGGTTT TGCCGTAATA TATCGCGTCG CGAGGCGGTG GTGATCAGCA TTCATCCGCA CAACGACCGG GGAACCGCCG TCGCCGCGGC TGAACAGGCC TTGCTGGCTG GGGCGGATCG TGTCGAAGGC TGCCTGTTTG GCAATGGTGA GCGGACGGGC AATGTCGATC TGGTGACCTT GGCCTTGAAC TTCTACTCGC AAGGGATCGA TCCGAAGCTC TCTTTTCCGG CGATCCGCGA CGTGGTGACG ACCGTTGAGC ATTGCAACGG ACTGCCCGTC CATCCACGTC ACCCCTATGC GGGCGAGCTG GTGCACACGG CCTTCTCCGG CTCGCATCAA GATGCGATCC GCAAAGGGTT CACCGCTCAT CGACAGCGCA ACGACGGCAT TTGGGAGATG CCCTATTTGC CCGTCGATCC GGCCGACATC GGCGAGACAT ACGAAGCGGT GATCCGCGTC AACAGCCAGT CCGGCAAGGG GGGCGTCGCC TGGGTGATCG AACAAGACAA GGGCCTGAAA CTGCCACGAT CGCTTCAGAG GGATCTCAGC CGTCGCGTTC AGGAATTCTC CGAGAAAAGC GGCAAGGAGA TCACCGCCGC GATGATCTGG TCGATCTTTC AGCAGGCTTA CCACCTGACG GGCCCGCAGG AGTTCGAACT CATCAGCTAT CAGGATGGGA ACTCCCGCAA AGCCGGGAAC CACCGCGTCT TCGCCGGGCG CATCCGTCAT AAGGGTCGCG AAATCGCCCT CTCCGGTCGT GGCAACGGCC TGATTTCCAG CGTTGTCGCC GCATTGGAAG ACGGCTGTGG CGTCGCGCTG GATGTGGTCG ACTTTCACGA ACATGCCTTG AAGCGTGGTT CGGATTCCCA GGCGGTTGCC TATCTCGAAT GTCGAACCCA AGACGATCGC CCGATTTTCG GAGTCGGTAT CGACGATGAT ATCGCAACGG CATCGGTCAA GGCCGTGCTC AGCGCCGCCA GCAACGGCTG A
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Protein sequence | MLTNPEIKYR PFVSPIELDD RKWPSKRLTK APRWLSTDLR DGNQALSDPM DVERKMRFYA MLLAIGFKEI EIAFPSASQT EFDFVRALIG GNRIPDDVTI QVLTPSRQDL IARTFESLEG ARQVIVHLYN ATAPLFRRVV FGMERHEIVD LAITGVSAML EESLRRPETD WTFEYSPETF CFTEPDFALE ICERVLDVWQ PTPERPAILN LPATVEVATP NVYADQIEWF CRNISRREAV VISIHPHNDR GTAVAAAEQA LLAGADRVEG CLFGNGERTG NVDLVTLALN FYSQGIDPKL SFPAIRDVVT TVEHCNGLPV HPRHPYAGEL VHTAFSGSHQ DAIRKGFTAH RQRNDGIWEM PYLPVDPADI GETYEAVIRV NSQSGKGGVA WVIEQDKGLK LPRSLQRDLS RRVQEFSEKS GKEITAAMIW SIFQQAYHLT GPQEFELISY QDGNSRKAGN HRVFAGRIRH KGREIALSGR GNGLISSVVA ALEDGCGVAL DVVDFHEHAL KRGSDSQAVA YLECRTQDDR PIFGVGIDDD IATASVKAVL SAASNG
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