| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rru_A0880 |
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| Symbol | |
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| ID | 3834600 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Rhodospirillum rubrum ATCC 11170 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007643 |
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| Strand | + |
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| Start bp | 1051001 |
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| End bp | 1053043 |
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| Gene Length | 2043 bp |
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| Protein Length | 680 aa |
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| Translation table | 11 |
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| GC content | 58% |
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| IMG OID | 637824968 |
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| Product | TonB-dependent receptor |
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| Protein accession | YP_425968 |
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| Protein GI | 83592216 |
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| COG category | [P] Inorganic ion transport and metabolism |
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| COG ID | [COG1629] Outer membrane receptor proteins, mostly Fe transport |
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| TIGRFAM ID | [TIGR01783] TonB-dependent siderophore receptor |
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Plasmid Coverage information |
| Num covering plasmid clones | 5 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGATGGCCA TTGTGGCTGC GATCTCCTTT GGCGGGATCG GCCCGTCGCA GGCTCAGGAG
ATGGATAGCG AGGATATCGA TGCCAGGAAA AAGGTTATAG AACTGGAGTC GCTGACGATC
ACGGCGAATA AACGGGATCA AAAAATAAAT GAGGTCGATG GTTCCGTTCT GGTGCGCGAC
GGGAAAGACC TTGAAAAAGC TCATGTAACC ACCGTTGCGG ATCTGGAACG CGTCTTTCCG
GGGCTGATGA TTCAATCGCG CGGTAGTCGT AGCTATGCGA ACTTCAGCCT GAGAGGGGTG
AATTCGCCCG ATTTCTACAA TCCGTCCATT CAGGTCTACG TGGACGGCGT GCCCCAGGAT
TCCACCTTTT TCACCCAAGA GTTGGTGAAC GTCGAGCGGG TCGAGCTTCT GCGAGGCCCC
CAGGGAACGC TTTATGGCGG AAACGCCTAT GCGGGCGTGA TCAATATCGT TTCGCGCAAG
CCCGACAACG CGGTCAAGGG CATGGTCGGC GGCATGGTGA GCACGGCTGG TGGTGAAACC
GAGACATCGC TTGCCGGACC GGTGGTGCGG GACGCGCTGT ATGGCGGCCT GTCGGCAAAA
TGGTCTCAGG CGTTCGGCCG GATCGACGAT ACCCTTACGG GAAAGGACGA TATCGATAGC
TCGAAGGGCG GCATGGTTCG CGGCCAGTTG CGCTATGCCC CCACGGGAAG CCCCTGGGAT
ATCACGGCGG CCGGACAGTA TGACCATCTG GTGTCCAATG AGGAGATCCC CGTCGAGGAT
CCCCATAAGC TGGTTTATAG CAGCGCCCTT TACGGAATTC CCGAATATAC TCGCAAAGTG
ACGACCGGGT CCGTGAACGC CAGTTATGAA TTCGACCGCG GGACCTTATC GAGCCTCACC
TCCTATCAGG ATCGTTCGCT CGAGCGCTTC GCCTATGCCA TGGAGCAGCC GGAATTCCAG
ACCACCCTGT CGCAGGAGGT CCGTTATGCC TTCGGGGACA AGGATGGCCC CTTGGATGGC
GTGGTCGGGG CCTTTTTCAA AGACACGGAT TTCACCCGCA AAACCGCGCA ATATTACACC
TACCAAGGTC CATCCGAAAA CGCGGTGGCC TCCAGGTCTT ATGCGCTTTT TGGCGAGATG
ACCCAAGCCC TGACTCCGGT TTTGGATGTG ACCGGTGGTT TGAGGTATTC CTATGATACC
TCGGAAATCG ACTTCACCCG CCAGGGGGCC AGTTTCTATC CGGCCCTGGA TTTCGAGAAT
TCGGCCGATT TCCATAATGT GTCGATGAAG CTGGCCCTTG GCTGGCAAAT CAATGAAGAC
AACCGGGTTT ATGGTTTGAT CAGCCGCGGC TATAAGCCCG GCGGCTTCAA TCACGCGGTG
ATGTCGGCGG CTGATCGGCA GGCCTTTGAT AACGAAACCT CGACCAATTA TGAGCTGGGC
TGGCATGGAA CGGTTGTCGA GGATCGCCTA TGGGTCAATG CCTCGGCCTA TCTGATCGAA
GCCGAGAACA AGCAGATCTA CGTTACCGCC GATTCCATGA CCGGATTGCA GGCCCTGCGC
AATCTGGGGG ATTCCCGCAG CTATGGCCTG GAAGTCGATG TGACGGCCCG TCCCCTGGAC
TCGGTTCAGG TCACGCTTGG TGGGACCTTT GGCCGGTCCG TCTTCGTATC CTCGACCGAT
CCGGTGACCG GTGAGGACTA CGATGGCAAA ACGCTTCCTT ATGCGCCCGA CTACACCCTC
AACGCCGCCA TCGAATATAC CCTGCCTCTT TCGTCTTTTC CGGGCGAGAT CAGCCTGCGC
GGCGCGGGGC GCTATGTGTC GGCCAGCTAT TTCGATCCGT CCAATAGCCT GAAGCAGGAT
GGCTATCCGG TTCTCGATCT GTCGGTCAAC CTGGCGACGG ACACGGGGAT CAAGGTCGCG
GTGTTTGCCG ATAACATCGC CGACCAAGGC TATCGGACTT ACTCCTATTC GGCCGGGGCC
ACGACCTATA GCACCGCCGG TCAGGGACGC ACCGTGGGCA TGCGGGCCAG TTGGGCCTTC
TGA
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| Protein sequence | MMAIVAAISF GGIGPSQAQE MDSEDIDARK KVIELESLTI TANKRDQKIN EVDGSVLVRD
GKDLEKAHVT TVADLERVFP GLMIQSRGSR SYANFSLRGV NSPDFYNPSI QVYVDGVPQD
STFFTQELVN VERVELLRGP QGTLYGGNAY AGVINIVSRK PDNAVKGMVG GMVSTAGGET
ETSLAGPVVR DALYGGLSAK WSQAFGRIDD TLTGKDDIDS SKGGMVRGQL RYAPTGSPWD
ITAAGQYDHL VSNEEIPVED PHKLVYSSAL YGIPEYTRKV TTGSVNASYE FDRGTLSSLT
SYQDRSLERF AYAMEQPEFQ TTLSQEVRYA FGDKDGPLDG VVGAFFKDTD FTRKTAQYYT
YQGPSENAVA SRSYALFGEM TQALTPVLDV TGGLRYSYDT SEIDFTRQGA SFYPALDFEN
SADFHNVSMK LALGWQINED NRVYGLISRG YKPGGFNHAV MSAADRQAFD NETSTNYELG
WHGTVVEDRL WVNASAYLIE AENKQIYVTA DSMTGLQALR NLGDSRSYGL EVDVTARPLD
SVQVTLGGTF GRSVFVSSTD PVTGEDYDGK TLPYAPDYTL NAAIEYTLPL SSFPGEISLR
GAGRYVSASY FDPSNSLKQD GYPVLDLSVN LATDTGIKVA VFADNIADQG YRTYSYSAGA
TTYSTAGQGR TVGMRASWAF
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