Gene Rru_A0660 details

Gene Information

• Locus tag: Rru_A0660
• ID: 3834298
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Rhodospirillum rubrum ATCC 11170
• Kingdom: Bacteria
• Replicon accession: NC_007643
• Strand: -
• Start bp: 783368
• End bp: 785245
• Gene Length: 1878 bp
• Protein Length: 625 aa
• Translation table: 11
• GC content: 64%
• IMG OID: 637824744
• Product: periplasmic sensor Signal transduction histidine kinase
• Protein accession: YP_425751
• Protein GI: 83591999
• COG category: [T] Signal transduction mechanisms
• COG ID: [COG4191] Signal transduction histidine kinase regulating C4-dicarboxylate transport system

Plasmid Coverage information

• Num covering plasmid clones: 9
• Plasmid unclonability p-value: 1
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

TTGGCCGGAT CCGCACCACT CAATCGGTTT TTCCTGCTGA CCCTGATCGG GCAGGTGGTC 
GCCCTTGCCG TCTATGCCGC GATAACCTGG ATGGATGTTC GCAACGACGC GATGATCCAG 
CTCCACTATA CGGCGCTGAC CTTCCGTTCG GCCTCGCAGA CCACCTTCGC CGGCTTTGAA 
AGCTCTCTCG ATGCCCTCGC CGATCAGTTG ATCGACAGCG ACGGGCTGAG CGACCCGACG 
AAGGGCCGGG CGATCTTGAC CAAAAGCCTT GGCACCCTGC CGGCTTTCAC CGTCTTGTCC 
GTGATCGCCG TCGATGGTCA GATCCGCGCC CTCAGCGAGG ACAGCCACGA TCCCCTTCCC 
AATCTTCTGA CCAATCCCGA CACTCGCGAA ACCTTCCTGC AAGCCCTGGA TAGCAAGGCC 
GCGGTTTTCG GGGAGATTTA TTACAGTCCG TTTTTGAAGC GCTGGGTTTT TCCCATCCGC 
AAGGCCGTCC GCGACGAAAA CGGAACCGTT ATCGCCGTTG TCGCCGGGGG CATCGATTCC 
AATGCCGCCG TCAACGTCTG GCGCGCCCTG GACGCCTTCG CCGATCAACG CATCTGGATG 
CTGCGCGCCG ATCGCGGCGT GCAAAACATC CATCCGATCT CCGCCGCCGA CATGCGGCGC 
CTGGAGGGCA CCGTTCTCCC CGCCCTCGCC GGCGGCTTCC CGCCCCAGGA GGGGCCGGCC 
CCGCTGATCG ACTGGCCGAT CCTTGAAGAC GAGATCGCCG TCACCCTGCC CTTCCCGGCG 
CTTTCGGGAA CCATCGTCGC TAGCATGAAG AAGTCGCTTC TCGTAAAAAC CTGGGTCCAC 
CGCATGGCGA CGGGGGGGCT TGGCTTCGTC TTTCTCTGCG TTGTCACCGC CGTGGTCTTC 
CGTCTTGCCC AAAGATCCCA GGCGGTGGCC GATGCCCGGC GCGAAGCGGC CGAGCACACC 
TTGTTCGAGT CGCGCGAAAA CTATCGTCTG CTCTATGAGA ACGTCGAAAC CCTGGTGAGG 
GACCGAACCG CCGAGTTGGC GGCGCTGGTC GACACCTTGA CCCGCACCCA AGCCGAATTG 
GTGCGCTCGG AAAAGCTGGC CTCGCTGGGG GCGATGGTCG CCGCCGTGGC CCATGAGGTG 
AACACTCCCG TCGGCAACGC CCTGGTGGCG GCGACGACGC TGAAGGACCA TACCCGCGCC 
TTCGCCACCC TGACCGCCTC GGGGCGGATC TCCCGGCAAG CCATCGCCGC TTACGTCGCA 
ACCACCGAGG AGGCCTGCGA CCTGCTGGTT CGCAGCCTTG AACAGGCCGG CCGGCTTGTC 
GGTACCTTCA AGCAGGTGGC CGTCGATCAG ACCAACGACC AGCGCCGGAG CTTCCTTTTG 
GATCAGACGA TCCAAGAGGT GATCACCGCG CTCAAGCCGT CGTTCCGCTA TCGCCCGATC 
ACCGTCAGCC TTGATCTCGC CGCCGCGGTC ACGATGGACA GCTTTCCCGG ATCCCTGGCC 
CAGGTCATCG GCAACCTTGT CACCAATGCC GTTGTCCATG GCTTCGATGA CCACGACTCC 
GGAGAGATCC GCATCATCAC TCGCAGCGTA GAAGCCCAGT CCGTGACCAT TGGCGTCAGC 
GACAATGGCC GGGGCATCGC TCCGGCGATT CTGCCCAAAA TCTTTGACCC CTTCTTTACG 
ACCCGCCTGG GACAAGGGGG CAGCGGCCTG GGACTTCACA TCGTCTATGG CATCGTCACC 
AAAATTCTTG GCGGTGGCCT GACGGTGGAC AGCGTCGAGG GCGAGGGAAC CCGCTTTACC 
CTCACCCTGC CCCGCGTCGC CCCCGCCGAA AAGCCCGTCG AGCAGCCCGT CCGGCCCAAG 
GAGGCCCTAA CGCCATGA 

 

Protein sequence

MAGSAPLNRF FLLTLIGQVV ALAVYAAITW MDVRNDAMIQ LHYTALTFRS ASQTTFAGFE 
SSLDALADQL IDSDGLSDPT KGRAILTKSL GTLPAFTVLS VIAVDGQIRA LSEDSHDPLP 
NLLTNPDTRE TFLQALDSKA AVFGEIYYSP FLKRWVFPIR KAVRDENGTV IAVVAGGIDS 
NAAVNVWRAL DAFADQRIWM LRADRGVQNI HPISAADMRR LEGTVLPALA GGFPPQEGPA 
PLIDWPILED EIAVTLPFPA LSGTIVASMK KSLLVKTWVH RMATGGLGFV FLCVVTAVVF 
RLAQRSQAVA DARREAAEHT LFESRENYRL LYENVETLVR DRTAELAALV DTLTRTQAEL 
VRSEKLASLG AMVAAVAHEV NTPVGNALVA ATTLKDHTRA FATLTASGRI SRQAIAAYVA 
TTEEACDLLV RSLEQAGRLV GTFKQVAVDQ TNDQRRSFLL DQTIQEVITA LKPSFRYRPI 
TVSLDLAAAV TMDSFPGSLA QVIGNLVTNA VVHGFDDHDS GEIRIITRSV EAQSVTIGVS 
DNGRGIAPAI LPKIFDPFFT TRLGQGGSGL GLHIVYGIVT KILGGGLTVD SVEGEGTRFT 
LTLPRVAPAE KPVEQPVRPK EALTP