Gene Rru_A0437 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRru_A0437 
Symbol 
ID3834003 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRhodospirillum rubrum ATCC 11170 
KingdomBacteria 
Replicon accessionNC_007643 
Strand- 
Start bp512107 
End bp513129 
Gene Length1023 bp 
Protein Length340 aa 
Translation table11 
GC content63% 
IMG OID637824521 
ProductOmpA family protein 
Protein accessionYP_425529 
Protein GI83591777 
COG category[M] Cell wall/membrane/envelope biogenesis 
COG ID[COG2885] Outer membrane protein and related peptidoglycan-associated (lipo)proteins
[COG3637] Opacity protein and related surface antigens 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones6 
Plasmid unclonability p-value0.0802247 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGACCAAGA CTTTTAAAAT CGCCGCTTTG GCAAGCGCCG CGGCATTCTT GCCCGTCGTG 
GCCCAGGCGC AGACGCCGGA AGGCGCCTAT GTCGCCTTGC ACGGTGGCGT GAACTTCAAC 
GTCGACCAGG AACTGTCCAT TCCGGGCGCC AAGGGCGACG CCAAGACCGA CACCGGCTAT 
GCCGCTGGCG GCGCGGCCGG TTACGCCTTC GGCGGCGGCC CCCGCCTGGA ATTGGAAGGC 
ACCTGGCGCA GCAACGATCT TTATAAGATC GGCAACCTGG GTACCAAGGG CAATCTCGAT 
TCCGCCAGCT TGATGGTCAA CGCCATCTAT GACATCCCGA CCGGGACCGA TTTCTACCCG 
TATTTGGGTG TCGGCGCCGG CGCGTCGTGG GTCTTTGCCG AAGCCAAGAA TTCCGGCGCC 
GGCTTCAAGG CCTATGACGA CGACATCGCC TTCGCTTATC AGGGCATCGC CGGTGTCGGC 
TACAACGTCG ATCAGAATAT CGGCGTGACC TTGGACTACC GCTTCCTCGG CACCACCGGT 
CTTGATTTCA AGACCAGCGC CGGCAAGGCC GATTACGACG CCTATTACAA CCACACCGTT 
TTGGTTGGCC TGCGTTACTC CTTCTCCAAG CCGTCGGCTC CGCCGCCGCC CGCCCCGGTG 
CAGGAAGTCG TTCAGCAGAG CGTTGTTGAG GTTCCCGAGT CCTATCTCGT GTTCTTCGAC 
TTCGACAGCA CCTCGATCAC CCCGGAAGCC GGTGGCATCA TCAACACCGC CGCGACCAAC 
GCCAAGTCGA CCGGGTCGTC GACCATCGAA GTGACCGGCC ACGCCGACCG CTCCGGTGGC 
GACGCCTACA ACTTGGCTCT GTCGAAGCGT CGCGCCGAGG CCGTTGTCGG CGAACTCGAG 
CGCAATGGCA TCTCGCGCTC GCAGATCGCC GTCTACGCCA AGGGCGAGGC CGATCCGCTG 
GTCCCGACTC CCGATGGCGT GCGCGAGCCG CAGAACCGCC GCGTGGTTGT CGTCCTGAAG 
TAA
 
Protein sequence
MTKTFKIAAL ASAAAFLPVV AQAQTPEGAY VALHGGVNFN VDQELSIPGA KGDAKTDTGY 
AAGGAAGYAF GGGPRLELEG TWRSNDLYKI GNLGTKGNLD SASLMVNAIY DIPTGTDFYP 
YLGVGAGASW VFAEAKNSGA GFKAYDDDIA FAYQGIAGVG YNVDQNIGVT LDYRFLGTTG 
LDFKTSAGKA DYDAYYNHTV LVGLRYSFSK PSAPPPPAPV QEVVQQSVVE VPESYLVFFD 
FDSTSITPEA GGIINTAATN AKSTGSSTIE VTGHADRSGG DAYNLALSKR RAEAVVGELE 
RNGISRSQIA VYAKGEADPL VPTPDGVREP QNRRVVVVLK