| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rru_A0403 |
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| Symbol | |
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| ID | 3833814 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Rhodospirillum rubrum ATCC 11170 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007643 |
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| Strand | - |
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| Start bp | 479891 |
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| End bp | 480604 |
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| Gene Length | 714 bp |
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| Protein Length | 237 aa |
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| Translation table | 11 |
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| GC content | 67% |
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| IMG OID | 637824487 |
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| Product | Short-chain dehydrogenase/reductase SDR |
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| Protein accession | YP_425495 |
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| Protein GI | 83591743 |
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| COG category | [I] Lipid transport and metabolism
[Q] Secondary metabolites biosynthesis, transport and catabolism
[R] General function prediction only |
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| COG ID | [COG1028] Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases) |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 8 |
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| Plasmid unclonability p-value | 0.140375 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGTCCGGCC GACTTCAAGA CCGTCACTGC TTCATCACCG GCGCCTCGCG CGGGATCGGC
AAGGCGGTGG CCAAGCTTTT CGCGGCGGAA GGCGCCCATG TCATCGCCCT GGCCCGCACC
CAGGGCGGGC TTGAGGAACT CGACGACGAG ATCCGCAGCG CCGGCGGCAC CCCGCCGACC
CTGATCACCG AGGATCTGAC CAATTTCGAC GCCATCGACC AGATCGGCGC CGCCCTGTTC
GAGCGCTTCG GCAAGATCGA CGTGCTGGTG GCCAATGGCG GCATCCTGGG CAGCCTGACC
CCGGTCAGCC ACATCAAGCC CAAGGAATGG GACGAGGTGA TCGCCACCAA TCTGACGGCG
AGCTACCGGC TGATCCGCTC GTTCGAACCG CTGCTCCGCC AGTCCGACGC CGGCCGGGCG
ATCTTCGTCA CCTCGGGCGC CGCCGATGGC GCGCGGCCTT ACTGGGCGAC CTATGGCATC
AGCAAGGGCG CCCTTGAGGT GATGGTCAAA ACCTGGTCCC AGGAAATCCT CAAGACCAAG
ATCAAGGCCA ATCTGCTCAA CCCCGGACGC ACGCGCACGC CGATGCGGGC CAAGGCCTTC
CCCGGCGAAG ACCCGGCCAC CCTGCCCACC CCCGAAGACA TCGCCAAGGC CTTCCTCCCC
CTCGCCCTGC CCGACTGCAC CCGCCACGGC GAAGTGGTCA ACGCCCAGGA ATAA
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| Protein sequence | MSGRLQDRHC FITGASRGIG KAVAKLFAAE GAHVIALART QGGLEELDDE IRSAGGTPPT
LITEDLTNFD AIDQIGAALF ERFGKIDVLV ANGGILGSLT PVSHIKPKEW DEVIATNLTA
SYRLIRSFEP LLRQSDAGRA IFVTSGAADG ARPYWATYGI SKGALEVMVK TWSQEILKTK
IKANLLNPGR TRTPMRAKAF PGEDPATLPT PEDIAKAFLP LALPDCTRHG EVVNAQE
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