Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Rru_A0314 |
Symbol | |
ID | 3833669 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Rhodospirillum rubrum ATCC 11170 |
Kingdom | Bacteria |
Replicon accession | NC_007643 |
Strand | + |
Start bp | 382129 |
End bp | 383646 |
Gene Length | 1518 bp |
Protein Length | 505 aa |
Translation table | 11 |
GC content | 66% |
IMG OID | 637824396 |
Product | hydrogenase 4 subunit D |
Protein accession | YP_425406 |
Protein GI | 83591654 |
COG category | [C] Energy production and conversion [P] Inorganic ion transport and metabolism |
COG ID | [COG1009] NADH:ubiquinone oxidoreductase subunit 5 (chain L)/Multisubunit Na+/H+ antiporter, MnhA subunit |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 2 |
Plasmid unclonability p-value | 0.0167658 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGCTTGATG ATGTTGTGAC CCGGGTCCTG CCCGCGGGCG GCGCCGCCGT CCCTGGTTCG GGCCATGGGC CGGGCGCCGT GCCCCGCTGG AACGGGGCGG GCCATCGGCC GGCTTCCCCC CGGGCCGGTG CCAATGGCGT GATTTTCCTG GCCTCGCTTA TCTTCTCGGG GCTGGCCCTG GCCGGCGCTA TCGCCGCCAT TCTGGCCGTT TTCCCCGGTC CCTGGACCCT CGGCCTGGGG CGTCTGCCCT GGCTTGCCAG CGATCAGGCC CTGTTCGGGC TGGCGCTTGA TCCGCTGTCG TGCCTGATGC TGGTGGTGAT CACGCTCTGC GGCTTCCTGG TGGTGCTCTA CTCGGGCGGT TACATGAGCC TGGGCAACGT CGAGCACCCC TCCGACGCCA ATCTGGCGCG CTATTACTTC TTTGTTTGCC TGTTCATCAC GGCGATGGTC GGGCTGGTGT CGTCGCCCAA TTACTTCCAG CTTTTCCTGT TCTGGGAACT GACGACGCTG TGTTCCTGGG GGCTGATCTC GTTCTATGGC GATGCCGAGG CCCTGAAGTC GGCCTATAAG GCGCTGCTCA TCACCCATGG CGCCGGGCTG TTCCTCGCCG CGGCCGTGGT GCTGATCTAT GTCGAGACCG GCTCTTTCGC GTTCGACGCG ATCAATCTGC TGACCCCGGG CCTGAAAAGT CTGGTGATCG CCTTCATGGG CATCGCCGCC CTGGCCAAGG CCGCCCAATT CCCCTTCTTC ACCTGGCTGC CCACCGCCAT GGCCGCCCCG ACCCCGGCCA GTTCCTATCT CCACGCCGCG GCGATGGTGA AGGCCGGCAT CTATCTGCTG GCGCGGCTGG CGCTCAGCGT CGACGCCTTC CCGCCCGAAC TCGGGCTGGC GCTCAGCGTC ATCGCCATCG TCACCATGTG TCTGGCCGTC GTCCTTTATT TCCCGCAAGA TGATCTGAAG CGGCTGCTCG CCTTCTCGAC CATCGCCAAT CTTGGCTACA TGGTTCTGGG CATCGCCATG GGCGCCATGG GCTCGCGGAC GGCGCTGGAA GGCGGGATGC TTCATCTCGT TGGCCATTCC TTCACCAAAA GCCTGCTGTT CCTCGCCGTC GGCGCCATTT CCTACGCCAC CGGCACCCGC AAGATCGGCC TGCTCAGCGG TCTGGGCCGC AAGATGCCGG TCACCGCGCT GGCCTTCGTG CTGGGCGCCA TGGCGATCAG CGGCATGCCG CCCTTCAACA TGTTCTGGTC CAAATACCTG ATCGTTTCGG GCGCCATCGA GCTCAGCTCG ACCTGGGGCT GGACGCTGGC CGTCCTCACC CTGGCCGAGA GCGTCGCCGG CTTCGCCTGG TTCTTGCACA TCGTCCACAA GGTCTTCTTC GGCCCCGTCT CCCCGACCGC CGAGAATGCG CGCGACCCCG GCGCGGCCAT GCTGATCCCC CTCATCGTCC TGATGGCCTT CAGCGTGCTC TCCACCGTTT TCGCGCTGCC CATGATCCAA CAGTCGTTCG GGGGGTGA
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Protein sequence | MLDDVVTRVL PAGGAAVPGS GHGPGAVPRW NGAGHRPASP RAGANGVIFL ASLIFSGLAL AGAIAAILAV FPGPWTLGLG RLPWLASDQA LFGLALDPLS CLMLVVITLC GFLVVLYSGG YMSLGNVEHP SDANLARYYF FVCLFITAMV GLVSSPNYFQ LFLFWELTTL CSWGLISFYG DAEALKSAYK ALLITHGAGL FLAAAVVLIY VETGSFAFDA INLLTPGLKS LVIAFMGIAA LAKAAQFPFF TWLPTAMAAP TPASSYLHAA AMVKAGIYLL ARLALSVDAF PPELGLALSV IAIVTMCLAV VLYFPQDDLK RLLAFSTIAN LGYMVLGIAM GAMGSRTALE GGMLHLVGHS FTKSLLFLAV GAISYATGTR KIGLLSGLGR KMPVTALAFV LGAMAISGMP PFNMFWSKYL IVSGAIELSS TWGWTLAVLT LAESVAGFAW FLHIVHKVFF GPVSPTAENA RDPGAAMLIP LIVLMAFSVL STVFALPMIQ QSFGG
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