| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rpic_5005 |
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| Symbol | |
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| ID | 6289890 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Ralstonia pickettii 12J |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010683 |
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| Strand | - |
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| Start bp | 52792 |
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| End bp | 54045 |
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| Gene Length | 1254 bp |
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| Protein Length | 417 aa |
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| Translation table | 11 |
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| GC content | 65% |
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| IMG OID | 642627399 |
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| Product | conjugal transfer protein TraB |
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| Protein accession | YP_001901365 |
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| Protein GI | 187930879 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG0815] Apolipoprotein N-acyltransferase |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 40 |
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| Plasmid unclonability p-value | 0.441858 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 18 |
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| Fosmid unclonability p-value | 0.356102 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCAGGCCA AAACGTTGCT CTCAGCTCTC GCCTACGCCG CGACCGGCGC TGGCATCGCG
TTCGCCGCCT GGTATCCCGG CAACTGGGTG ATCGTGCTGC TTGCGCTGCC GGTGCTCTGG
GCGGCAAGCC CGGGCCGAGT TGCAGCGGGC ACGATGTGGG CCGGCTACTA CCTGGTGGCC
GCTCGTGACA TCCCGGTCGT ATGCGCCCGG TTTTTCTCGG TCCACGGCGA ACTGGGTGCG
ACGCCGGCAC TCGCCGTCGG CGTCGCGTTC TGGATCGCCC AGGCCTGCGT GCTTGCAATG
CCATGGATGG TGCTCAAGCC GGAGCCGGCA TCGCGTCAAC GCGGCCTCTG GTGGCGCGCG
GCGTTGGCGC TGCTGGTATC GACCGTGCCA CCCATCGGCA TCGTCGGCTG GGTCTCGCCG
TTGCATGTCG CCAGCGTCTT GCTTCCGGGT GCCGGCATCT ACAGCCTGGT GTATGCCGTT
CTCGTTTTAG CCGGGCTGGC GTGCTATCCC TTGTGGCTGT TCCCTATGCG TCGGCCCGCC
GCGCTCGGCG CTGCGTTGGT GCTCCTGGTT GCTCCTGTGG CCTCTTCCGA GGCGCTTCCA
CGGCCGCCGG CGGGCTGGGT CGCGGTCAAT ACGGCAATGG GCCAGCTCGA CCAGGCCAGC
TATGCAGCCC TCTATGCGCG CTCCGAAGCG TTGCAGCTCG CCGCACGCAA GGCGTTCGAC
GCCGGCGCGC GCGTCGTCGT CTTGCCGGAA GAAATGACCG GTCTGTGGCG CGACTCTACG
CAGTTCTGGT GGGATAGCTC ACTTACTCAA CTCAAGGACT CAAGGAAAAC ACTCGTCATG
GGTGTTGACC TGCGCGTTTC GGAATCACCC CGCCGCTACG CAGACAGCGC CATCGTGCTC
GGCGCTGGCG ATGGCCGATT CGACAGCCGC CAGCCGGTGC CGGCAGGCCT GTGGCGGCCC
ATGGCGCCCC TGAGCGCCGT TCTAGGTGAC CTTAGCCAAG ACTTCCTCAC CATCGATGGT
CACCGTGCGG CGTTTTCCAT CTGCTACGAA GACTTCCTGT TCTGGCCGCA CTGGCGCCTG
TTCCTGGTTC GCCCGGATGT GCTGCTCGGC CTGGCCAACA ACTGGTTTGA CGACGGCCTG
GCCGTTGGCG AGATCCAGCG TCAAAGCATT TCTTCTATTG CACGCATTGC CGGCGTTCCG
CTTCTGCGCG CCGTCAACGT GCCCAACTCA CCCACCCTCA ACGCAAAACC ATGA
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| Protein sequence | MQAKTLLSAL AYAATGAGIA FAAWYPGNWV IVLLALPVLW AASPGRVAAG TMWAGYYLVA
ARDIPVVCAR FFSVHGELGA TPALAVGVAF WIAQACVLAM PWMVLKPEPA SRQRGLWWRA
ALALLVSTVP PIGIVGWVSP LHVASVLLPG AGIYSLVYAV LVLAGLACYP LWLFPMRRPA
ALGAALVLLV APVASSEALP RPPAGWVAVN TAMGQLDQAS YAALYARSEA LQLAARKAFD
AGARVVVLPE EMTGLWRDST QFWWDSSLTQ LKDSRKTLVM GVDLRVSESP RRYADSAIVL
GAGDGRFDSR QPVPAGLWRP MAPLSAVLGD LSQDFLTIDG HRAAFSICYE DFLFWPHWRL
FLVRPDVLLG LANNWFDDGL AVGEIQRQSI SSIARIAGVP LLRAVNVPNS PTLNAKP
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