| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rpic_4298 |
|---|
| Symbol | |
|---|
| ID | 6285528 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Ralstonia pickettii 12J |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_010678 |
|---|
| Strand | + |
|---|
| Start bp | 594314 |
|---|
| End bp | 594790 |
|---|
| Gene Length | 477 bp |
|---|
| Protein Length | 158 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 64% |
|---|
| IMG OID | 642618780 |
|---|
| Product | transcriptional regulator, AsnC family |
|---|
| Protein accession | YP_001892821 |
|---|
| Protein GI | 187926476 |
|---|
| COG category | [K] Transcription |
|---|
| COG ID | [COG1522] Transcriptional regulators |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 22 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 40 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGGCCCCAC AGAAATCGCT CGAACTCGAC GCCTTCGACA TCGCCATCCT CAACGCCGTG
CAGCGGTGCT ACACCACGCC GCTGCGTGTG ATCGGGGAGG AGGTCAATCT ATCGACCGCA
GCCGTGCAGC GGCGCATCAA GCGGATGGAG GAGGCGGGCG TCATCGTCGG CAACGTGGCG
GTGGTGCACC CTGAGCGGGT GGGCAAACCC ATCACCGTGA TCGTTGAGGT GCATGCCGAG
CGCACCAATA CCGCGGCAAT GGCCGCGCTC AAGAGGGCGC TCTCCGGCCC AGAGGTGCAG
CAGTGCTACT ACGTGACCGG CGAGGCCGAT TTCGTCCTCA TCCTGAACGT GGCCACGATG
ACGGAATACG AAGCCCTCGC GCGCCGCCTG TTCGACGACA ACGACAACAT CAAGTGGTAC
CGCACGGCCG TGGTGCTCAA CCGAGTGAAG GTTGGGCTTG AGGTACCACT GGGTTAG
|
|---|
| Protein sequence | MAPQKSLELD AFDIAILNAV QRCYTTPLRV IGEEVNLSTA AVQRRIKRME EAGVIVGNVA
VVHPERVGKP ITVIVEVHAE RTNTAAMAAL KRALSGPEVQ QCYYVTGEAD FVLILNVATM
TEYEALARRL FDDNDNIKWY RTAVVLNRVK VGLEVPLG
|
|---|
| |