Gene Rpic_3981 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRpic_3981 
Symbol 
ID6285241 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRalstonia pickettii 12J 
KingdomBacteria 
Replicon accessionNC_010678 
Strand
Start bp247489 
End bp248769 
Gene Length1281 bp 
Protein Length426 aa 
Translation table11 
GC content66% 
IMG OID642618472 
ProductChloride channel core 
Protein accessionYP_001892513 
Protein GI187926168 
COG category[P] Inorganic ion transport and metabolism 
COG ID[COG0038] Chloride channel protein EriC 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones18 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones35 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAAGAAAA TGGCTACACG CTCCGAGCCG CTGCTCATGT TCGGGTATCT GCTGCGCTGG 
CTTTCGCTCG GTTCGCTCGT CGGCATGCTC GCCGGGCTTG GCTCTGCGGT GTTGCTGATG
GCGCTCGATT GGGCAACCAA CACGCGCACC GCACACCCTT GGCTGCTGTG GTTCCTGCCC
GTGGCGGGGC TGGCCGTGGG CTTGCTCTAC CACTACACGG GGCGCTCGGT GGAAGGCGGC
AACAATCTGC TCATCGACGA GATCCACGAC CCCAAGCGTG TCGTCCCCAA GCGCATGGCG
CCGCTCATCC TGCTGAGCAC CGTTGTCACC CACATCTTTG GCGGGTCAGC CGGGCGTGAG
GGCACGGCCG TGCAGATGGG CGGCAGCTTT GCTGATTACC TGACGCGGCT GTTCTCATTG
GCCCCGGCGG ACCGGCGCAT CTTGCTGATG GCGGGCATCA GCGCCGGTTT CGCGTCGGTG
TTCGGCACGC CGCTGGCCGG TGCCGTATTT GGACTGGAAG TGCTTGCGAT CGGCCGTTTG
CGCTATGACG CGATCCTGCC GTGCTTCATC GCGGCCATCG TGGGCGACCT GGTGCCACCG
CTGCTGGGCG TGCACCACAC GCCGTATGCG ATTCCGTTTG TGCCGCATCT CACGCCCGTC
GCGATCGGCC TGGTCGTGGT GGCCGGCATC GTCTTCGGTC TGGCGGGCAT GACGTTCGCG
GCGCTCACGC ACCGGCTCAG CCGCCTGTTG AAGCGTCACA TCGCCTTTGG GCCGCTCCGC
CCCGTGCTGG GCGGCAGCGT GGTCGTGGCG GCGGCGTTGG CGCTGGGGAC GGACAAATAT
CTCGGCCTCG GCATTCCGGT CATCGTGGAT ACGTTCCACA ATCCGCTGCC CGCCTACGAC
TTTGCCGGCA AGGCGGCCTT CACCATCGTG ACGCTGGCGT CCGGTTTCAA GGGCGGTGAG
GTCACGCCGC TGTTCTACAT CGGCGCCACG CTGGGCAATG CGTTGGGTTA CGTGCTGCCG
TTGCCCTTCC CGCTGCTGGC GGGCCTTGGG TTCGTTGCCG TGTTTGCGGG TGCCGCCAAT
ACGCCCATCG CGTCGACCTT GATGGCGATG GAACTCTTCG GCCCCGAAGT CGGCACATTT
GCTGGCATTG CCTGCGTGGT GAGCTATCTC TTCTCAGGCC ACACCGGCAT CTATCATGCG
CAGCGCATCG GCCATGCGAA GCGCCCTACC GAAGCAGCGC CGGCAGGGCA GGTTCCGGCC
GAGTCAGCCG AGCGCCCTTA G
 
Protein sequence
MKKMATRSEP LLMFGYLLRW LSLGSLVGML AGLGSAVLLM ALDWATNTRT AHPWLLWFLP 
VAGLAVGLLY HYTGRSVEGG NNLLIDEIHD PKRVVPKRMA PLILLSTVVT HIFGGSAGRE
GTAVQMGGSF ADYLTRLFSL APADRRILLM AGISAGFASV FGTPLAGAVF GLEVLAIGRL
RYDAILPCFI AAIVGDLVPP LLGVHHTPYA IPFVPHLTPV AIGLVVVAGI VFGLAGMTFA
ALTHRLSRLL KRHIAFGPLR PVLGGSVVVA AALALGTDKY LGLGIPVIVD TFHNPLPAYD
FAGKAAFTIV TLASGFKGGE VTPLFYIGAT LGNALGYVLP LPFPLLAGLG FVAVFAGAAN
TPIASTLMAM ELFGPEVGTF AGIACVVSYL FSGHTGIYHA QRIGHAKRPT EAAPAGQVPA
ESAERP