Gene Rpic_2399 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRpic_2399 
Symbol 
ID6288020 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRalstonia pickettii 12J 
KingdomBacteria 
Replicon accessionNC_010682 
Strand
Start bp2493783 
End bp2494625 
Gene Length843 bp 
Protein Length280 aa 
Translation table11 
GC content65% 
IMG OID642625976 
Productglycosyl transferase family 2 
Protein accessionYP_001899965 
Protein GI187929478 
COG category[R] General function prediction only 
COG ID[COG1216] Predicted glycosyltransferases 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones16 
Plasmid unclonability p-value0.378112 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones34 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGCAAGCT CTGAGTCGCC GCGTCGCATC GCCCTCATCG TTACGACGTA TAACCGCCCG 
GACGCGCTGG TTCGCGTACT GGCCGGCTGC AGCGCACAGA CCGATCGCGC ATTCGATGTC
ATCGTCGCCG ACGACGGTTC GCGCGATGAC ACACGCTTTG CCATCGAAGC CGCCGCCAAG
ACCGCGCCGT ATCCGCTGCG CCATGTCTGG CATCCCGACG ACGGCTTCCG TGCCGGTGAG
ATCCGCAACC GCGGCGTGCT GGCGACGGAC GCCGACTACC TCGTTTTTCT CGATGGCGAT
TGCGTGCCGC GTCCGGATTT TGTGGCGCGG CACCGCGCAT TGGCCGAGCG GGGGCGCCTG
CTGTCCGGCA GCCGCATCCT GCTGAATGAG GCGATGACGC GCGAGGTCGT CGCCCAGCAG
ATCGACATCC ACCTGAAGGA TCGCGCGTAT TGGTTTGCCG CCTGGCGCGC CGGCCGCGTC
AACAAATTCG TGCCGCTATT GGTGCCGGGC TTACCGGTGC CGCGTACCCT CAAGGACACC
AGCCTGCGCG GCATCAAGAG CTGCAACCTT GGCGTGTGGC GCAGCGATTT CGAGCGCGTG
AACGGTTTCG ATCAGAGCTT CGTCGGATGG GGCCATGAAG ACGCCGATCT GGCGGTTCGC
CTTTATAACG CCGGCGTGCG GCGCAAGCGC GGTTTTTGCG CGACCGAAGT CTTCCACCTA
TGGCATCGCG AGCAATCGCG CGAGCAGGAA AGCCCCAACT ATCAACGCAT GATGGCTCGG
CGCAATACCG ACATCATCCG CGCAGACGTC GGGCTTGCAG AACTGCGAGA GCAGGGCGCC
TGA
 
Protein sequence
MASSESPRRI ALIVTTYNRP DALVRVLAGC SAQTDRAFDV IVADDGSRDD TRFAIEAAAK 
TAPYPLRHVW HPDDGFRAGE IRNRGVLATD ADYLVFLDGD CVPRPDFVAR HRALAERGRL
LSGSRILLNE AMTREVVAQQ IDIHLKDRAY WFAAWRAGRV NKFVPLLVPG LPVPRTLKDT
SLRGIKSCNL GVWRSDFERV NGFDQSFVGW GHEDADLAVR LYNAGVRRKR GFCATEVFHL
WHREQSREQE SPNYQRMMAR RNTDIIRADV GLAELREQGA