Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Rpic_1576 |
Symbol | |
ID | 6289083 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Ralstonia pickettii 12J |
Kingdom | Bacteria |
Replicon accession | NC_010682 |
Strand | + |
Start bp | 1664199 |
End bp | 1665926 |
Gene Length | 1728 bp |
Protein Length | 575 aa |
Translation table | 11 |
GC content | 43% |
IMG OID | 642625141 |
Product | hypothetical protein |
Protein accession | YP_001899147 |
Protein GI | 187928660 |
COG category | [S] Function unknown |
COG ID | [COG5293] Uncharacterized protein conserved in bacteria |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 16 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 33 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGTTTCTAA AGTCGCTTCG AATTGAGAAT GAAAACGGTG TCATTCGACA TATACCTTTT CATGCAGGTC TCAATCTCAT TGTTGATGAA ACGCCGGACA GCAATAACGA GGCGACAGGA AACAATGTTG GCAAAACGAC AGTACTACGC TTGATAGATT TCTGCTTTGG TGGCAGTCCG AAAGAGATTT ACACGGACCC GGAAGACAGG AAGAGCGAGC ATCAGATCGT CAAAAATTTC CTGCAAAAAA CGTATGTTTT GATTACATTG ACACTCACGT CGGATCTTTC GAATCCTCGC TCGGAGGAGA TTGTCATCGA AAGAAATTTT CTCCCTAGAA AGGGAATGAT CCGTCGAATC AACGGCAATC AATTAACAGA AGAAGAATTC ACGCACACCC TCACAGAGAA ACTTTTTCCT GGCCAATCCG GCAAAAAGCC CTCGTTGGGT CAGCTAATTT CACACAATAT CCGTTACAAG GATTTCTCGC TTACAAACAC CCTTCGTCAT GTTCATCCCA TGACAAAGGA TGAGGAATAC GAAGCACTTC ACCTCTACAT GCTGGGGTGT GATTTCTCAC GTGGGGATGA GAGACAAAAG CTCATCGGCG ATTTGCGTGT TGAGAATGCT TTTAAGGCAA GATTGGAGGC CGCTGGATCA AAGTTCGTAT ATGAGACGCT TCTTTCGCGA ATCCAACGCG AAATCGAAAA ACTCAATCAC CGAAGAGCCT CCTTTAACAT CAATCCAGAT TTTGAAAGAG ATTTGCAGCG TCTCGATGAA ATCAAGTACG GAATCAACAC CGAGTCGTCC ATAATTGGAG CAATAAAGCT GCGGCGCAAT TTGCTGACCG AAGCAGTCGC CGATACGCAA GCACGTCGAT TTCAAGTAGA CACAGTTCAG TTAAAAGCAC TTTACGCGGA AGTATCCTCT CGGCTATCTG GGGTGCAAAA GACATTTGAT GAATTGGTTG AATTTCACAA CAAAATGGTC GACGAGAAAT CTAGATACAT TTCTCGGGAC ATACCTTTGT TGGAAGAGGA GATAGCGAAC CGAGAGGCTG AACTGAGTCG TCTACTCGAC TTGGAAAGAA ATCTTGCCGC CAAGCTGGCC AAAAGTGGTT CGCTCAATGA GCTTGAACTT GTAATATCGG AACTGAACGA GAAACATCGG CTGCTTGGAG AGTATCAAAC TGTTATCAGA CAGATCGACG CAACGAGCGA AAGAATAGGA AAAATTGAGG GACAACTATC GGAGATTGAC GGCGATTTGT TTTCAGGCGA AACACAATCC GTCATTCAAT CTCAGGTACA TAGATTCAAT GAATTTTTCT CGAAAATATC CGAAGAACTT TACGATGAGC AATACGCACT CACTTTTGAA ATTGTAAAAA CAAGGTCAGG AAGACAGGTT TACAAGTTCA AAACGTTCAA CATGAACATG AGTTCCGGAA AGAAGCAAGG TGAGATATCT TGCTTTGATA TCGCATATAC ACTATTCGCG GACGACGAAA ATATTCCATG CATGCATTTC TTACTAAACG ACAAGAAAGA GCTCATGCAT GACAATCAGT TATTAAAAAT CGCCAACCTC GTAGAAAGAG AGAAAACGCA TATCCAATTT GTGGCCTCGA TGCTAAGAGA TAAATTGCCG CCCGAGCTCA ACAGCGACAA TTTTATTGTC CTAAAACTTT CACAAGATGA TATGCTCTTT AATATTGAAT CCAATTAA
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Protein sequence | MFLKSLRIEN ENGVIRHIPF HAGLNLIVDE TPDSNNEATG NNVGKTTVLR LIDFCFGGSP KEIYTDPEDR KSEHQIVKNF LQKTYVLITL TLTSDLSNPR SEEIVIERNF LPRKGMIRRI NGNQLTEEEF THTLTEKLFP GQSGKKPSLG QLISHNIRYK DFSLTNTLRH VHPMTKDEEY EALHLYMLGC DFSRGDERQK LIGDLRVENA FKARLEAAGS KFVYETLLSR IQREIEKLNH RRASFNINPD FERDLQRLDE IKYGINTESS IIGAIKLRRN LLTEAVADTQ ARRFQVDTVQ LKALYAEVSS RLSGVQKTFD ELVEFHNKMV DEKSRYISRD IPLLEEEIAN REAELSRLLD LERNLAAKLA KSGSLNELEL VISELNEKHR LLGEYQTVIR QIDATSERIG KIEGQLSEID GDLFSGETQS VIQSQVHRFN EFFSKISEEL YDEQYALTFE IVKTRSGRQV YKFKTFNMNM SSGKKQGEIS CFDIAYTLFA DDENIPCMHF LLNDKKELMH DNQLLKIANL VEREKTHIQF VASMLRDKLP PELNSDNFIV LKLSQDDMLF NIESN
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