Gene Rpic_1576 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRpic_1576 
Symbol 
ID6289083 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRalstonia pickettii 12J 
KingdomBacteria 
Replicon accessionNC_010682 
Strand
Start bp1664199 
End bp1665926 
Gene Length1728 bp 
Protein Length575 aa 
Translation table11 
GC content43% 
IMG OID642625141 
Producthypothetical protein 
Protein accessionYP_001899147 
Protein GI187928660 
COG category[S] Function unknown 
COG ID[COG5293] Uncharacterized protein conserved in bacteria 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones16 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones33 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTTTCTAA AGTCGCTTCG AATTGAGAAT GAAAACGGTG TCATTCGACA TATACCTTTT 
CATGCAGGTC TCAATCTCAT TGTTGATGAA ACGCCGGACA GCAATAACGA GGCGACAGGA
AACAATGTTG GCAAAACGAC AGTACTACGC TTGATAGATT TCTGCTTTGG TGGCAGTCCG
AAAGAGATTT ACACGGACCC GGAAGACAGG AAGAGCGAGC ATCAGATCGT CAAAAATTTC
CTGCAAAAAA CGTATGTTTT GATTACATTG ACACTCACGT CGGATCTTTC GAATCCTCGC
TCGGAGGAGA TTGTCATCGA AAGAAATTTT CTCCCTAGAA AGGGAATGAT CCGTCGAATC
AACGGCAATC AATTAACAGA AGAAGAATTC ACGCACACCC TCACAGAGAA ACTTTTTCCT
GGCCAATCCG GCAAAAAGCC CTCGTTGGGT CAGCTAATTT CACACAATAT CCGTTACAAG
GATTTCTCGC TTACAAACAC CCTTCGTCAT GTTCATCCCA TGACAAAGGA TGAGGAATAC
GAAGCACTTC ACCTCTACAT GCTGGGGTGT GATTTCTCAC GTGGGGATGA GAGACAAAAG
CTCATCGGCG ATTTGCGTGT TGAGAATGCT TTTAAGGCAA GATTGGAGGC CGCTGGATCA
AAGTTCGTAT ATGAGACGCT TCTTTCGCGA ATCCAACGCG AAATCGAAAA ACTCAATCAC
CGAAGAGCCT CCTTTAACAT CAATCCAGAT TTTGAAAGAG ATTTGCAGCG TCTCGATGAA
ATCAAGTACG GAATCAACAC CGAGTCGTCC ATAATTGGAG CAATAAAGCT GCGGCGCAAT
TTGCTGACCG AAGCAGTCGC CGATACGCAA GCACGTCGAT TTCAAGTAGA CACAGTTCAG
TTAAAAGCAC TTTACGCGGA AGTATCCTCT CGGCTATCTG GGGTGCAAAA GACATTTGAT
GAATTGGTTG AATTTCACAA CAAAATGGTC GACGAGAAAT CTAGATACAT TTCTCGGGAC
ATACCTTTGT TGGAAGAGGA GATAGCGAAC CGAGAGGCTG AACTGAGTCG TCTACTCGAC
TTGGAAAGAA ATCTTGCCGC CAAGCTGGCC AAAAGTGGTT CGCTCAATGA GCTTGAACTT
GTAATATCGG AACTGAACGA GAAACATCGG CTGCTTGGAG AGTATCAAAC TGTTATCAGA
CAGATCGACG CAACGAGCGA AAGAATAGGA AAAATTGAGG GACAACTATC GGAGATTGAC
GGCGATTTGT TTTCAGGCGA AACACAATCC GTCATTCAAT CTCAGGTACA TAGATTCAAT
GAATTTTTCT CGAAAATATC CGAAGAACTT TACGATGAGC AATACGCACT CACTTTTGAA
ATTGTAAAAA CAAGGTCAGG AAGACAGGTT TACAAGTTCA AAACGTTCAA CATGAACATG
AGTTCCGGAA AGAAGCAAGG TGAGATATCT TGCTTTGATA TCGCATATAC ACTATTCGCG
GACGACGAAA ATATTCCATG CATGCATTTC TTACTAAACG ACAAGAAAGA GCTCATGCAT
GACAATCAGT TATTAAAAAT CGCCAACCTC GTAGAAAGAG AGAAAACGCA TATCCAATTT
GTGGCCTCGA TGCTAAGAGA TAAATTGCCG CCCGAGCTCA ACAGCGACAA TTTTATTGTC
CTAAAACTTT CACAAGATGA TATGCTCTTT AATATTGAAT CCAATTAA
 
Protein sequence
MFLKSLRIEN ENGVIRHIPF HAGLNLIVDE TPDSNNEATG NNVGKTTVLR LIDFCFGGSP 
KEIYTDPEDR KSEHQIVKNF LQKTYVLITL TLTSDLSNPR SEEIVIERNF LPRKGMIRRI
NGNQLTEEEF THTLTEKLFP GQSGKKPSLG QLISHNIRYK DFSLTNTLRH VHPMTKDEEY
EALHLYMLGC DFSRGDERQK LIGDLRVENA FKARLEAAGS KFVYETLLSR IQREIEKLNH
RRASFNINPD FERDLQRLDE IKYGINTESS IIGAIKLRRN LLTEAVADTQ ARRFQVDTVQ
LKALYAEVSS RLSGVQKTFD ELVEFHNKMV DEKSRYISRD IPLLEEEIAN REAELSRLLD
LERNLAAKLA KSGSLNELEL VISELNEKHR LLGEYQTVIR QIDATSERIG KIEGQLSEID
GDLFSGETQS VIQSQVHRFN EFFSKISEEL YDEQYALTFE IVKTRSGRQV YKFKTFNMNM
SSGKKQGEIS CFDIAYTLFA DDENIPCMHF LLNDKKELMH DNQLLKIANL VEREKTHIQF
VASMLRDKLP PELNSDNFIV LKLSQDDMLF NIESN