Gene Rpic_1421 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRpic_1421 
Symbol 
ID6288484 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRalstonia pickettii 12J 
KingdomBacteria 
Replicon accessionNC_010682 
Strand
Start bp1511253 
End bp1512107 
Gene Length855 bp 
Protein Length284 aa 
Translation table11 
GC content64% 
IMG OID642624988 
ProductAnkyrin 
Protein accessionYP_001898994 
Protein GI187928507 
COG category[R] General function prediction only 
COG ID[COG0666] FOG: Ankyrin repeat 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones23 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones27 
Fosmid unclonability p-value0.321761 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCGATACC GCGATAACTT GAAGCAAGCG ATGAAAAAAA TCGCACTGGC TGGTGCGCTG 
ACCATGGCGT TGTCGGGTGC CGCATTCGCC ACGCCGCAGG ACGATCTGCG CAACGCCGTC
GAATACAACC GCCCGGCGCT GGTGCAGAAG TATGTCGCGC AGGGCGTCGA CCCCAACCTG
AAGACCCGCG ATGGCACGCC GCTGCTGGTG GATGCGCTCA AGGAGAAGAA CATCGAGGTG
GCCGAGGCGC TCATCCGCGC CAAGAACATC GATTTCGAGC GCACCAATGC CGCAGGTGAA
AACGCGCTGA TGATGGCCGC GTACCAGGGC CTGCTGCCCA TGGTGAAGCT GATGGTGGAA
ACGTACGACG TGGAGGTCAA CAAGACCGGC TGGACCGCGC TGCATTACGC CGCCACCAAT
GGGTATGACG ACATCGTCAA ATACCTGCTC GACCACGCGG CCTATATCGA TGCCGAAAGC
CCCAACGCGA CCACGCCGCT GATGATGGCC GTCATGGGCG GGCACATCAC CACCGTCAAG
CTCCTGCTGG ACGAGGGCGC CGACATGAAC CTGCGCAATC AGCAGAAGAT GGACGTGATC
GACTTCGCCA AGCGGTATCA CCAGGATGAG ATTGCTGCGG GGCTGGAATC GCGCCGGCGC
AAGCTGGCGG AGCAATCCGG CAAGCCTGCT GCAGCACCGG CGCCTGCGGC CGCAGTCTCG
CAGCCTGCCA AGCCTGCAGC GCCGGATGTG CCAACGCCGA TGCCGCCCGC CAAACGCGGC
GCCGGTGCGC CCAGCCCGGC CGGTCGGGAT ACGATCGGCA CGCCCACCAA CATGCTGTTT
GACAGCAACC GCTAG
 
Protein sequence
MRYRDNLKQA MKKIALAGAL TMALSGAAFA TPQDDLRNAV EYNRPALVQK YVAQGVDPNL 
KTRDGTPLLV DALKEKNIEV AEALIRAKNI DFERTNAAGE NALMMAAYQG LLPMVKLMVE
TYDVEVNKTG WTALHYAATN GYDDIVKYLL DHAAYIDAES PNATTPLMMA VMGGHITTVK
LLLDEGADMN LRNQQKMDVI DFAKRYHQDE IAAGLESRRR KLAEQSGKPA AAPAPAAAVS
QPAKPAAPDV PTPMPPAKRG AGAPSPAGRD TIGTPTNMLF DSNR