| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rpic_1080 |
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| Symbol | |
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| ID | 6286137 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Ralstonia pickettii 12J |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010682 |
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| Strand | + |
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| Start bp | 1151654 |
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| End bp | 1152649 |
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| Gene Length | 996 bp |
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| Protein Length | 331 aa |
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| Translation table | 11 |
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| GC content | 62% |
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| IMG OID | 642624653 |
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| Product | cytochrome d1 heme region |
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| Protein accession | YP_001898660 |
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| Protein GI | 187928173 |
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| COG category | [S] Function unknown |
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| COG ID | [COG3391] Uncharacterized conserved protein |
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| TIGRFAM ID | [TIGR02276] 40-residue YVTN family beta-propeller repeat |
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Plasmid Coverage information |
| Num covering plasmid clones | 17 |
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| Plasmid unclonability p-value | 0.952849 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 38 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGTCTGCCT TGCGCGCCTC GTTTGCCTCC CATTGGTTCT CCACGCTGGT CCTGTCGGCC
GCTGCTCTGA TGGCCGCGCA TGCGGCGCGT GCTGAAGTCG TCACCGTGCT CAATTCGGGC
GACGCAAGCG TCTCTTTGAT CGACAAGGAC ACCCGCAAGG TGTTGGAGAC GTTCCCGATC
GGCAAGGAGC CGCACCACCT GATCGCCACG CCCGACGAAA AGTCGTTGAT CATCGCCAAC
GCTGTGGGCA ACGAGCTGGT GTTTCTCGAT CCCGTGACCG GCAAGATTCA GCAGCGCGTG
CCGCGCATCG ACGATCCATA CCAGATCGGC TTCTCGCCCG ACCAGAAGTG GTTTCTGACC
ACCGGCAACC GGCTGGACCG CATTGATATT TACCGCTGGG ACGGCCATGC GCTGACCATC
GCCAAACAGA TTCCAGCGGC GAAGACACCC AGCCACATCG CCTTTACCGC CGACAGCAAG
ATCGCGTTCG TCACCGTGCA GGATTCCAAT GAAGTGATGG CCATCGACCT GCCCACGCAG
ACCGTGATGT GGCGCATGAC CATTGGCTCC GCGCCGGCCG GCGTGTGGGT CACAACAGAT
CAGAAATACC TGCTGGTCGG CATGACCGGC GCCGATTACG TCGAAGTGAT CGACTGGCAC
AACCGCACCA GCGTCAAGCG CATCCCGACT GGCAAGGGCG CGCACAACTT CCGCGCGCTG
GGCGACAAGC GTCACCTGTT CCTCTCGAAC CGCGTGTCAG GCACGATCAG CATCATCGAT
CAGCAAACGC TGACCAAGGT GGGCGACATC ACAGGCCTGC CGCCCGGCCC CGACGACATG
GAACTGACCG CCGACGGCAA GCAACTCTGG GTGACCTGCC GCTGGGCCAA GCGCGTGGCG
ATCGTCGACG TTGCAAGCCG CAAGGTCGTG GAAGAGATCA AGGTCGGGCG ATCGCCGCAC
GGCATTTACT TCCGCACGCG CGCTCCACTG AATTGA
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| Protein sequence | MSALRASFAS HWFSTLVLSA AALMAAHAAR AEVVTVLNSG DASVSLIDKD TRKVLETFPI
GKEPHHLIAT PDEKSLIIAN AVGNELVFLD PVTGKIQQRV PRIDDPYQIG FSPDQKWFLT
TGNRLDRIDI YRWDGHALTI AKQIPAAKTP SHIAFTADSK IAFVTVQDSN EVMAIDLPTQ
TVMWRMTIGS APAGVWVTTD QKYLLVGMTG ADYVEVIDWH NRTSVKRIPT GKGAHNFRAL
GDKRHLFLSN RVSGTISIID QQTLTKVGDI TGLPPGPDDM ELTADGKQLW VTCRWAKRVA
IVDVASRKVV EEIKVGRSPH GIYFRTRAPL N
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