Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Rpic_0921 |
Symbol | |
ID | 6288104 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Ralstonia pickettii 12J |
Kingdom | Bacteria |
Replicon accession | NC_010682 |
Strand | + |
Start bp | 975057 |
End bp | 975689 |
Gene Length | 633 bp |
Protein Length | 210 aa |
Translation table | 11 |
GC content | 63% |
IMG OID | 642624485 |
Product | anti sigma-E protein, RseA |
Protein accession | YP_001898503 |
Protein GI | 187928016 |
COG category | [T] Signal transduction mechanisms |
COG ID | [COG3073] Negative regulator of sigma E activity |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 15 |
Plasmid unclonability p-value | 0.194686 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 25 |
Fosmid unclonability p-value | 0.151017 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGGGTCAGG CTCAATTGCA AACGGCAGAA GCGGAGTTCG CACAACGCAT CTCTGCCTTG ATGGACGGTG AGGTTGCGGC GCACGAAGTG CCGGCTGCCG TGGAACTCGC CAAGGAAGGC GAGGGTGCGG CGCATTGGCG AGAATATCAA CTGATCGGCG ACGTGCTCCG GTCAGAAGAT CTGCTGAACA CGCATTCCTC GGAAGATTTC CTCCGCCGGT TCTCGGCCAA GCTCGACGCC GAGCCTCATC TGCTGGTACC GGCTGTAGCG CAGCGTGCGA AAACCCAAGA GAGGCACCGT TTCCTGGTCA GCCCCGCTTG GGTCCGACGG ATCATGCCTA CAACCGCAGT GGCGGCGGCA GTGGCGGCCG TTAGCTGGGT CGTCGTTCCG CAACTGCGCG GACCTGCGGA TGGTGCGGAA GGCTCTCCCG CACTGGTCGC CAAGGCGACG CAAGGTGCCG GCGCGCAGGC GCTAACTGTG GCGGCAGCTG ACAATACGCC GATGATCCGC GACGCCCGGC TGGACGAATA CCTGAGCGCC CACAGGCAAT CTGCGACCAA CGGGATGGTA GTTCCGTATC TGCGCGCAGT GGCCAATGGG GTGGCGAACA CCCAGGACTC CAATCAGGAA TAA
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Protein sequence | MGQAQLQTAE AEFAQRISAL MDGEVAAHEV PAAVELAKEG EGAAHWREYQ LIGDVLRSED LLNTHSSEDF LRRFSAKLDA EPHLLVPAVA QRAKTQERHR FLVSPAWVRR IMPTTAVAAA VAAVSWVVVP QLRGPADGAE GSPALVAKAT QGAGAQALTV AAADNTPMIR DARLDEYLSA HRQSATNGMV VPYLRAVANG VANTQDSNQE
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