| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rpic_0670 |
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| Symbol | |
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| ID | 6286501 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Ralstonia pickettii 12J |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010682 |
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| Strand | + |
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| Start bp | 709385 |
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| End bp | 710029 |
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| Gene Length | 645 bp |
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| Protein Length | 214 aa |
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| Translation table | 11 |
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| GC content | 58% |
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| IMG OID | 642624232 |
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| Product | Tfp pilus assembly protein FimT-like protein |
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| Protein accession | YP_001898253 |
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| Protein GI | 187927766 |
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| COG category | [N] Cell motility
[U] Intracellular trafficking, secretion, and vesicular transport |
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| COG ID | [COG4970] Tfp pilus assembly protein FimT |
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| TIGRFAM ID | [TIGR02532] prepilin-type N-terminal cleavage/methylation domain |
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Plasmid Coverage information |
| Num covering plasmid clones | 17 |
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| Plasmid unclonability p-value | 0.648692 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 29 |
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| Fosmid unclonability p-value | 0.521585 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | ATGCGCGCAT TGGTTCGCGG TTCTCTTTTC GCCCTTTGGT TTCGCAAAGT CGTTCAGGCT
CACCCGAGCT TGGTATCGGC GCGACTGCGC TATTCGCGCG CACTACAAGG CCAATCGGGC
GGCTCGCCTA TTGTCACGAC ATTATTGGCA ACTCGCGGCT TCACGCTGAC CGAGCTAATG
GTGGTCTTGG CGATTCTCGC CATTCTCTTG GTGGTCGCGA TCCCTTCTTT CGCACCGATG
CTGCGTAGCA ATCGTGTTTT TGCTGTGCAA ACTGAGGTCA TGTCCTCGCT CGCTTTGGCG
CGAAGCGAGG CCGCTAAACG CGGCATTCCA GTGAGCGTGG TTTTGTCAGG CGCGTCTGGA
GTGGTAGGTA ACGAATGGGG CGCGGGTTGG TCTGTCTGGG TCGATTTAAA TGCCAACGGG
GTGGTTGATA GTGGGGAGGT GTTGCGTGCA CACGATGCCT TGCCACCTGG GTTCACGCTG
AGCGTGCCGA ACAACGGCGC TCTCAAGTTC GATGCCCATG GTTTTCTGTC GCCGGCCGTG
CTGCGCCAAT TGAAGGTGTG TTCCACCGCC AGCGGTACGT CGGGATATCA AATCACGATT
CAGCCGAACG GACTGGTCGA TGCTGCCAGC GCAACGTGCC CATGA
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| Protein sequence | MRALVRGSLF ALWFRKVVQA HPSLVSARLR YSRALQGQSG GSPIVTTLLA TRGFTLTELM
VVLAILAILL VVAIPSFAPM LRSNRVFAVQ TEVMSSLALA RSEAAKRGIP VSVVLSGASG
VVGNEWGAGW SVWVDLNANG VVDSGEVLRA HDALPPGFTL SVPNNGALKF DAHGFLSPAV
LRQLKVCSTA SGTSGYQITI QPNGLVDAAS ATCP
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