Gene Rpic_0628 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRpic_0628 
Symbol 
ID6289036 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRalstonia pickettii 12J 
KingdomBacteria 
Replicon accessionNC_010682 
Strand
Start bp668283 
End bp669125 
Gene Length843 bp 
Protein Length280 aa 
Translation table11 
GC content55% 
IMG OID642624189 
Productglycosyl transferase family 2 
Protein accessionYP_001898211 
Protein GI187927724 
COG category[M] Cell wall/membrane/envelope biogenesis 
COG ID[COG1215] Glycosyltransferases, probably involved in cell wall biogenesis 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones21 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones39 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGATGATCA CCGCTAACCC TCGGCCGTTC TCCGTCTTGA TGTCACTGTA CGCTCGGGAA 
TCACCCGCAG CGCTTGAAGT GGCGCTTGCC AGTTTGACCC AGCAGACGCT TCAGCCGGAC
GAAACGGTCA TCGTGCTAGA TGGTCCTGTC AGAAAGGACC ATCTCGACAT ACTGCAGCGC
TATGAGTCCG CCTTGGCGAT GAAGATCGTG CCTCTTGACA AGAATGTGGG CCTTGCCCGC
GCTCTTGCTG CTGGCCTCGA ACAATGTAGG CACGAGTGGA TTGCCCGCTT TGATACCGAC
GACTGGTCGC ATCCGGAGCG TTTTGCTCGC CAACACGCGT TTCTGGATGC TCATCCCACG
GTGGGACTTC TCGGATCTTG GATCGGCGAG TTCGAAGCAA ACCCTACACT CATTACACGA
GTGCGCAGCG TGCCGCTGAC ACACGAAGCG ATTGTTCGCT ACGCACGTCG GCGTAATCCG
TTCAACCACA TGACAGTGAT GTATCAACGG TCGGCAGTAC TAGCTGTCGG AGGGTACCGA
GATCTGCCGT GGATGGAAGA CTACTGGCTA TGGGTTAGGA TGCTGCATGC CGGTGTAGAG
GCGGCAAATC AGTCAGATCT GCTCGTACAT GCAAGGGCAG GTCTCGAAAT GATTGGGCGC
CGGGGAGGCG CTGCGTACGT ACGCAGCGAA TGGATGGCGC AACGCCAGTT TTGCCTGTAT
GGCTTCATTT CACCGTTGAC TGCAATCACG AATTTTCTTC TACGCGCCAT ACCTCGGTTG
CTGCCGACCG CGATTCGTAA TCGATTATAT GCAAAAGCGC TACGCACAAA AATAAAGGCG
TAA
 
Protein sequence
MMITANPRPF SVLMSLYARE SPAALEVALA SLTQQTLQPD ETVIVLDGPV RKDHLDILQR 
YESALAMKIV PLDKNVGLAR ALAAGLEQCR HEWIARFDTD DWSHPERFAR QHAFLDAHPT
VGLLGSWIGE FEANPTLITR VRSVPLTHEA IVRYARRRNP FNHMTVMYQR SAVLAVGGYR
DLPWMEDYWL WVRMLHAGVE AANQSDLLVH ARAGLEMIGR RGGAAYVRSE WMAQRQFCLY
GFISPLTAIT NFLLRAIPRL LPTAIRNRLY AKALRTKIKA