Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Rpic_0606 |
Symbol | |
ID | 6288175 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Ralstonia pickettii 12J |
Kingdom | Bacteria |
Replicon accession | NC_010682 |
Strand | - |
Start bp | 642674 |
End bp | 643537 |
Gene Length | 864 bp |
Protein Length | 287 aa |
Translation table | 11 |
GC content | 69% |
IMG OID | 642624167 |
Product | protein of unknown function DUF477 |
Protein accession | YP_001898189 |
Protein GI | 187927702 |
COG category | [R] General function prediction only |
COG ID | [COG1512] Beta-propeller domains of methanol dehydrogenase type |
TIGRFAM ID | |
| ![](https://exploration.weizmann.ac.il/pandatox/images_new/ic_cp.jpg)
![](https://exploration.weizmann.ac.il/pandatox/images_new/ic_hh.jpg)
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Plasmid Coverage information |
Num covering plasmid clones | 20 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 38 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGTCGATGC GCGCGCGTGC CTGCTTCACC CTCTTGCTGA CTGTGGCGCT GTGGCTGGCC ACTGCGTTGC CTGCGCGCGC GCAAAGCGAC ATGGTGGCCG TGCCGCCGCT GGCCGCGCGC GTGACCGACC TGACCGGCAC GCTCAGCGCC GAGCAGAAGA GCGCGCTCGA GCAGGTGCTG GCCGACTACG AGCAGCAGCG CGGCAGCCAG ATCTTTGTGC TGATGGTGCC GTCCACCGCG CCGGAACCCA TCGAGGCGTA CGGCATCCGC GTGGCCGATG CGTGGAAGGC TGGCCGCAAG GGCGTGGACG ACGGCGCGAT CATCCTCATC GCCAAGGACA ACCCGGCATC GCTGCGCAAG ATGCGTATAG AGGTGGGGCG CGGGCTGGAA GGTGCGCTGA CGGACGCGCA ATCAAAGCGT GTCCTGCAGG ACGTGATGGC GCCGCACTTC CGCCAGGGCG ATTTCTACGG CGGGCTGTCG GCAGGTATCT CGGCCATCCA GACCGTCATT GCACTAGAGA GCCTGCCGCC GGCCGAGCGC GCCAAGCGTC AGCAATCCGG CGGCGGCATC GGTGATTGGC TGCCCGTGCT GTTTCCGCTG GCGATCATTG TGTTCTTCGT GCTCAGCGCG GCCATGCGCT CAGGCGGACG TGTGACGGGC AGCCTGCCCG GCCGCCCCGG CTCGCGCGTG GTAATGGGCA ATCGCGGCTG GGGCCCCGGC ACCATCGGTG GCTTGGGCGG TGGATTGGGT GGCGGCTGGG GACGCGGCGG CGGTGATTTC GGTGGCGGCG GCGGTGGAGG CGGCGGTTTT AGCGGCGGGG GTGGTGGTGA TTTCGGTGGC GGTGGCGCCT CCGGCAACTG GTAA
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Protein sequence | MSMRARACFT LLLTVALWLA TALPARAQSD MVAVPPLAAR VTDLTGTLSA EQKSALEQVL ADYEQQRGSQ IFVLMVPSTA PEPIEAYGIR VADAWKAGRK GVDDGAIILI AKDNPASLRK MRIEVGRGLE GALTDAQSKR VLQDVMAPHF RQGDFYGGLS AGISAIQTVI ALESLPPAER AKRQQSGGGI GDWLPVLFPL AIIVFFVLSA AMRSGGRVTG SLPGRPGSRV VMGNRGWGPG TIGGLGGGLG GGWGRGGGDF GGGGGGGGGF SGGGGGDFGG GGASGNW
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