Gene Rpic_0606 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRpic_0606 
Symbol 
ID6288175 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRalstonia pickettii 12J 
KingdomBacteria 
Replicon accessionNC_010682 
Strand
Start bp642674 
End bp643537 
Gene Length864 bp 
Protein Length287 aa 
Translation table11 
GC content69% 
IMG OID642624167 
Productprotein of unknown function DUF477 
Protein accessionYP_001898189 
Protein GI187927702 
COG category[R] General function prediction only 
COG ID[COG1512] Beta-propeller domains of methanol dehydrogenase type 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones20 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones38 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTCGATGC GCGCGCGTGC CTGCTTCACC CTCTTGCTGA CTGTGGCGCT GTGGCTGGCC 
ACTGCGTTGC CTGCGCGCGC GCAAAGCGAC ATGGTGGCCG TGCCGCCGCT GGCCGCGCGC
GTGACCGACC TGACCGGCAC GCTCAGCGCC GAGCAGAAGA GCGCGCTCGA GCAGGTGCTG
GCCGACTACG AGCAGCAGCG CGGCAGCCAG ATCTTTGTGC TGATGGTGCC GTCCACCGCG
CCGGAACCCA TCGAGGCGTA CGGCATCCGC GTGGCCGATG CGTGGAAGGC TGGCCGCAAG
GGCGTGGACG ACGGCGCGAT CATCCTCATC GCCAAGGACA ACCCGGCATC GCTGCGCAAG
ATGCGTATAG AGGTGGGGCG CGGGCTGGAA GGTGCGCTGA CGGACGCGCA ATCAAAGCGT
GTCCTGCAGG ACGTGATGGC GCCGCACTTC CGCCAGGGCG ATTTCTACGG CGGGCTGTCG
GCAGGTATCT CGGCCATCCA GACCGTCATT GCACTAGAGA GCCTGCCGCC GGCCGAGCGC
GCCAAGCGTC AGCAATCCGG CGGCGGCATC GGTGATTGGC TGCCCGTGCT GTTTCCGCTG
GCGATCATTG TGTTCTTCGT GCTCAGCGCG GCCATGCGCT CAGGCGGACG TGTGACGGGC
AGCCTGCCCG GCCGCCCCGG CTCGCGCGTG GTAATGGGCA ATCGCGGCTG GGGCCCCGGC
ACCATCGGTG GCTTGGGCGG TGGATTGGGT GGCGGCTGGG GACGCGGCGG CGGTGATTTC
GGTGGCGGCG GCGGTGGAGG CGGCGGTTTT AGCGGCGGGG GTGGTGGTGA TTTCGGTGGC
GGTGGCGCCT CCGGCAACTG GTAA
 
Protein sequence
MSMRARACFT LLLTVALWLA TALPARAQSD MVAVPPLAAR VTDLTGTLSA EQKSALEQVL 
ADYEQQRGSQ IFVLMVPSTA PEPIEAYGIR VADAWKAGRK GVDDGAIILI AKDNPASLRK
MRIEVGRGLE GALTDAQSKR VLQDVMAPHF RQGDFYGGLS AGISAIQTVI ALESLPPAER
AKRQQSGGGI GDWLPVLFPL AIIVFFVLSA AMRSGGRVTG SLPGRPGSRV VMGNRGWGPG
TIGGLGGGLG GGWGRGGGDF GGGGGGGGGF SGGGGGDFGG GGASGNW