| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rpic_0586 |
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| Symbol | |
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| ID | 6287086 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Ralstonia pickettii 12J |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010682 |
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| Strand | - |
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| Start bp | 620247 |
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| End bp | 621209 |
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| Gene Length | 963 bp |
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| Protein Length | 320 aa |
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| Translation table | 11 |
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| GC content | 61% |
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| IMG OID | 642624147 |
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| Product | type II secretion system protein |
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| Protein accession | YP_001898169 |
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| Protein GI | 187927682 |
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| COG category | [N] Cell motility
[U] Intracellular trafficking, secretion, and vesicular transport |
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| COG ID | [COG2064] Flp pilus assembly protein TadC |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 13 |
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| Plasmid unclonability p-value | 0.180812 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 28 |
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| Fosmid unclonability p-value | 0.546922 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCAAGCGC TCTATTCCAA TCAATATTTC ATCCTGGTCC TGATCTTCGT GGCTGCCTTT
GGCGGTGCGC TCGGGCTATT GCACCTGTTC TCTCCGAACC GCGCACGCGG GCGGATACAA
CAGATCGGCG GTCAGACCGT GGGTGCAGAC CTGGCCGGGG GCCCTGACCA TGCCTGGGTA
GAGAAATTGG CCACGTGGGC CAAGCCGGTC TCGCAACTGT CGTTGCCCAA AGATGGCTGG
GAGAACTCGC AACTGCGCAT CCGCTTCATG AATGCCGGCT GGCGGCAACC GTGGGCGCCG
TCGCTGTACT TTGCTGTGAA GACGGTGCTC GCGATCCTCT TACCGCTGGC GGCACTGCTG
GTGCTGAGCA GCCGGCCGGA ACATCACGAC CAGGAGGTGG TCCTCGCTGT TCTGGGGCTG
CTGAGCGCCA TTGGCTATTA CCTGCCCAAT GCGGCACTGG CACGCAAGGT CGAGCATCGT
CAGCGAGATG TATTTGAAGA ATTTCCCGAT ATGCTTGACT TGCTCACGGT GTGTGTAGAA
GCCGGGCTCG GCCTGGACGC TGCCATGATG CGCGTGTCGG ACGAACTCGC GCTGCGCTGC
CCCGTAATGG CTGAAGAAAT GGAACTCACG CTGCTGGAAC TGCGTTCCGG GTTTCCGAAG
GAAAAGGCAC TCACCAACCT GGCGCTGCGC ACCGGTGTGG AAGACGTCGA CCGGTTTGCA
TCGATGCTGA TCCAGGCTGA CCGTTTCGGT ACCAGCCTTG CCGACTCGCT GCGCGTGTTG
TCAGACATGC TGCGTACCAA GCGCCGCATG CGTGCCGAAG AACAGGCCGC CAAGATCGCG
CTGAAGCTGC TCTTCCCGCT GATCTTCTTC ATCTTCCCTA CGCTGCTTCT GGTGTTGCTC
GGCCCAGCAT TCATCCAGAT CTACCGTGTG CTGCTGCCGA CCATGACAGC CTCGGGAGGC
TGA
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| Protein sequence | MQALYSNQYF ILVLIFVAAF GGALGLLHLF SPNRARGRIQ QIGGQTVGAD LAGGPDHAWV
EKLATWAKPV SQLSLPKDGW ENSQLRIRFM NAGWRQPWAP SLYFAVKTVL AILLPLAALL
VLSSRPEHHD QEVVLAVLGL LSAIGYYLPN AALARKVEHR QRDVFEEFPD MLDLLTVCVE
AGLGLDAAMM RVSDELALRC PVMAEEMELT LLELRSGFPK EKALTNLALR TGVEDVDRFA
SMLIQADRFG TSLADSLRVL SDMLRTKRRM RAEEQAAKIA LKLLFPLIFF IFPTLLLVLL
GPAFIQIYRV LLPTMTASGG
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