Gene Rpic_0315 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRpic_0315 
Symbol 
ID6287383 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRalstonia pickettii 12J 
KingdomBacteria 
Replicon accessionNC_010682 
Strand
Start bp331364 
End bp332335 
Gene Length972 bp 
Protein Length323 aa 
Translation table11 
GC content66% 
IMG OID642623882 
ProductAlpha/beta hydrolase fold-3 domain protein 
Protein accessionYP_001897905 
Protein GI187927418 
COG category[I] Lipid transport and metabolism 
COG ID[COG0657] Esterase/lipase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones17 
Plasmid unclonability p-value0.732601 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones34 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAGCTGGC AGAACTGGGT CGTCTCTAGG ATGGTGCGCA ACCAGATCAA GAAGCCGACC 
GAGCGGGAGC CCTTCGACCC GATCGCCACA CGCCTGCATG CCGAGAAGCG CAAGATGCCT
TCGCCGGTGG AGCTGCCGCC GGATTGGCGT ATCGTCCCGG CCGATGGTGT CAACGGCGAT
GGCCTCACCG GCGAATGGAT TGAACCCGCC GATCCGGACC TGCATGACGA CGCGCCGGTC
GTGCTTTATC TGCATGGCGG CGGCTATTTC TTCTGCAGCC CGCGCACACA TCGCCCGATC
ACCATTGGCC TCGCCACGCA TGCCCGGGCG CGGGTGTGCG TGCCGGACTA CCGGTTGGCA
CCCGAGCATC CGTTTCCTGC GCCGGTGGAA GATGCGCTCT TCACGTATCG CACGCTGGTG
ACGCAGGGCG TGTCGCCCTC GCGCATTGTG GTGGCCGGCG ATTCCGCGGG CGGCGGGCTG
GCGTTGGCGC TGCTGGTGGC CTTGCGTGAT GCGGCAGACC CGCTGCCGGC GGGCGCGGTG
CTGTATTCGC CGTGGACGGA TCTTGCCGCC ACCGGCCAGA GCCTGATCGA CAACGATGAA
TCCGACGTGA TGTTTCGCGG CGCGTGGATG GCGCATGGTG CGGCGTTGTA CCTGGGCGAT
TCGGGCGCAC CGGCCGACCA TCCGCTCGCC TCGCCGCTGT ATGCCGATTT CACGGGCCTG
CCCACACTGC ACTGCTATGT CAGCACCAGC GAAGTGCTGC GCGACGATAC CCTCCGAATG
GCCGAGCGGG CGCGGGCGGC CGGGGTATCC GTATCGGTAG AAATGGGGCG GCGGCTTCCT
CACGTGTGGC CGATCTTCTA TCCTTTCCTT CCAGAGGCGC GCGTAGCGCT CAAACGATCG
GGCGAGCAGA TCAGGCGACT GGTTGCCGCC CAGCACAAGA ACCGAGAACC GGTGGAACTG
ACACCGGCCT GA
 
Protein sequence
MSWQNWVVSR MVRNQIKKPT EREPFDPIAT RLHAEKRKMP SPVELPPDWR IVPADGVNGD 
GLTGEWIEPA DPDLHDDAPV VLYLHGGGYF FCSPRTHRPI TIGLATHARA RVCVPDYRLA
PEHPFPAPVE DALFTYRTLV TQGVSPSRIV VAGDSAGGGL ALALLVALRD AADPLPAGAV
LYSPWTDLAA TGQSLIDNDE SDVMFRGAWM AHGAALYLGD SGAPADHPLA SPLYADFTGL
PTLHCYVSTS EVLRDDTLRM AERARAAGVS VSVEMGRRLP HVWPIFYPFL PEARVALKRS
GEQIRRLVAA QHKNREPVEL TPA