| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rpic_0171 |
|---|
| Symbol | |
|---|
| ID | 6286507 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Ralstonia pickettii 12J |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_010682 |
|---|
| Strand | + |
|---|
| Start bp | 188551 |
|---|
| End bp | 189216 |
|---|
| Gene Length | 666 bp |
|---|
| Protein Length | 221 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 71% |
|---|
| IMG OID | 642623742 |
|---|
| Product | putative lipoprotein |
|---|
| Protein accession | YP_001897766 |
|---|
| Protein GI | 187927279 |
|---|
| COG category | [R] General function prediction only |
|---|
| COG ID | [COG3218] ABC-type uncharacterized transport system, auxiliary component |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 24 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 34 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGCCGATGT TGTCCGCTGT GTTCCGCCGC GCGTGCGCGC TGCCTGCCCT GATGGCGCTG
TCGCTCCTGG CAGCTTGCTC CAGCGCGCCG GTGGCGCCCG CCGCCCTCTA TGACTTTGGA
CTCGCGCCTG CCGCAAGCGC TGGCGCGCGC CTGCCCACCG CCTTGCGCGT GGCCGACGTG
GCCGGCCCGG GCTGGATGGA CGGCAACGCC ATCTATTACC GCCTCGCCTA TGCGCAAGGC
CAGCGTACCG ACGCCTACGC CAACAGCCGC TGGGTGGAAT CGCCCGTGAG TCTGTTCGAT
GCCCGTTTGC GCAATGCGGC GGCAGGGCGC GGCCAGGTGA TCGGCTATCC CACGCCCGAT
GTGCCGAGCC TGCGTGTCGA GCTGGTCGAT TTTTCACAGG TATTCGACAG GCCCGATGCC
AGCCGCGGCG TGGTGCGCCT GCGAGCAACC GTGTCACTGG CGCGCGGTGT GATCGACCAG
CGCGTGGTAC AGGCTGACGC GCCGGCCCCG AGCCCGGACG CTGCAGGCGG CGTGGCCGCC
CTCACGCAGG CATCGGACAA GGCCATCGGC GAGGTGCTCG ACTGGGTGGC GGGCCTGCCG
CTCGCGGCGT CCGCCTCTTC GACACCGGCA ACGCCCGGCG CTGCACTTGG CACGCGCCGG
CGCTAA
|
|---|
| Protein sequence | MPMLSAVFRR ACALPALMAL SLLAACSSAP VAPAALYDFG LAPAASAGAR LPTALRVADV
AGPGWMDGNA IYYRLAYAQG QRTDAYANSR WVESPVSLFD ARLRNAAAGR GQVIGYPTPD
VPSLRVELVD FSQVFDRPDA SRGVVRLRAT VSLARGVIDQ RVVQADAPAP SPDAAGGVAA
LTQASDKAIG EVLDWVAGLP LAASASSTPA TPGAALGTRR R
|
|---|
| |