Gene Rpic_0123 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRpic_0123 
Symbol 
ID6287789 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRalstonia pickettii 12J 
KingdomBacteria 
Replicon accessionNC_010682 
Strand
Start bp142784 
End bp143389 
Gene Length606 bp 
Protein Length201 aa 
Translation table11 
GC content65% 
IMG OID642623694 
ProductDSBA oxidoreductase 
Protein accessionYP_001897718 
Protein GI187927231 
COG category[Q] Secondary metabolites biosynthesis, transport and catabolism 
COG ID[COG3917] 2-hydroxychromene-2-carboxylate isomerase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones18 
Plasmid unclonability p-value0.553572 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones39 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAACGGGG CCATCGATTT CTACTTCGAC TTCTCGTCGC CGTACGGCTA CTTCGCCAGC 
ACGCGCGTGG AGGAGCTCGC CCAGCGGTAC AACCGGGCGA CGGCATGGCA CCCGATCCTG
CTGGGGGTCG TCTTCAAGAC CACCGGCGGC TCCCCGCTGC CTCAGGTGCC GCTCAAGGGC
GATTACGCGT GGCGCGATTT CGAGCGTACC GCGCGCTTCA ACGGCATTGA GTACCGCAAG
CCGACGCACT TCCCGCTGCC CACGCAATAC GCCGCGCGGG CCACGCTGTG GGTGCATGAC
CATCACGGCG GGGACCGCGC GATCGACTTC GCACGGGCCG TCTACCGCGC ACTGTTCGTT
GACGACATCA ACATCGGTGA GCCGACCGAG GTCATGAAGA TTGCCGACGC GATGGGCATC
GACGGCGCCG CACTCAACGC CGGCGCAAGC AGCCAGCAGA TCAAGGACCA GCTCAAGGCC
GAGATCGACC TGGCGATGTC GCGCGGCGTG TTCGGCTCGC CCTACGTGAT CGTCGACGGC
GAGGCGTTCT GGGGCTTCGA CCGCTTTGAC CAGATTGAAG CGTTGCTGCG CGACGGACGG
ATATAA
 
Protein sequence
MNGAIDFYFD FSSPYGYFAS TRVEELAQRY NRATAWHPIL LGVVFKTTGG SPLPQVPLKG 
DYAWRDFERT ARFNGIEYRK PTHFPLPTQY AARATLWVHD HHGGDRAIDF ARAVYRALFV
DDINIGEPTE VMKIADAMGI DGAALNAGAS SQQIKDQLKA EIDLAMSRGV FGSPYVIVDG
EAFWGFDRFD QIEALLRDGR I