| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rpic12D_5140 |
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| Symbol | |
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| ID | 8007720 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Ralstonia pickettii 12D |
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| Kingdom | Bacteria |
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| Replicon accession | NC_012849 |
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| Strand | + |
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| Start bp | 39888 |
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| End bp | 41207 |
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| Gene Length | 1320 bp |
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| Protein Length | 439 aa |
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| Translation table | 11 |
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| GC content | 66% |
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| IMG OID | 644822354 |
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| Product | major facilitator superfamily MFS_1 |
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| Protein accession | YP_002973614 |
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| Protein GI | 241114139 |
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| COG category | [G] Carbohydrate transport and metabolism |
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| COG ID | [COG2814] Arabinose efflux permease |
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| TIGRFAM ID | [TIGR00900] H+ Antiporter protein |
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Plasmid Coverage information |
| Num covering plasmid clones | 7 |
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| Plasmid unclonability p-value | 0.0730511 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 24 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGTTGGATG TCCTTGCCAA TCGGACGTAC CGCCACCTTT TCTTCGCCCA GGTCATTGCG
CTGGTCGGAA CAGGGCTGGC CACCGTCGCA CTGGGCCTGC TGGCCTTCGA CTTGGCAGGT
GCGGACGCGG GCGCAGTGCT CGGCACCGCG CTGGCCATCA AGATGGTGGC CTACATCGGC
GTCGCACCCA TCGCCTCGGC GTTTGCCGAC AGGGTGCCGC GCCGCACCTT GCTGGTTGCG
CTGGACCTCG TGCGCGCCGC CGTCGCGCTG GTGCTGCCCT TCGTCACGGA GATCTGGCAG
GTCTACGTGC TGATCTTCGT GTTGCAGTCG GCCTCTGCGG GTTTCACGCC CACATTCCAG
GCGACGATCC CTGATGTGCT GCCCAAGGAG GCGGACTACA CCAAGGCCTT GTCGCTATCG
CGCCTGGCCT ATGACCTTGA GAGCCTGGCC AGTCCGGCGC TGGCTGCAGC ACTGCTGACC
GTGGTCAGCT TCCACAGCCT TTTCCTTGGG ACGGTTGTGG GTTTCGTCGC CTCGGCCGTA
CTGGTTGTCT CTACCGTGCT CCCCAAGGCA AAGCAGCCGC CGCGGCGCAG CATCTACGAG
CGCACCACGC GCGGCAGCCG CATCTACCTC TCCACACCGC GGCTGCGCGG CTTGCTAGCG
TTGAACCTCG CTGTCGCGTC CGCCAGCGCC ATGGTCATCG TCAACACGGT GGTGCTGGTG
CAGAGCCAGC TGCAGCTCAA CCAGCGTTTC ACGGCCGGCG CACTGGCGGC CTTCGGCGGC
GGCTCCATGC TGATTGCCCT TGGGCTACCC AAGCTCCTGG AGCGCTTGCC CGACCGGCGC
GTCATGGTCT TTGGCGCGTC TGTCCTGACC ATCGGCCTGC TGCTTGGACC CTTGGCGACG
GGCAACTATG CGGCGCTCGT GGTGCTGTGG CTGCTGTTGG GCATGGGCTA CTCCCTCGCT
CAAACGCCGT CCGGCAGGCT GCTGCGCCGC TCGGCCAGCG AGCAGGACCG ACCAGCGCTT
TTCGCCGCGC AGTTCGCGCT TTCGCACGCC TGTTGGCTCA TCACCTACCC GGTCGCCGGA
TGGCTGGGCG CCAAGGCCGG CCTGAACGCC AGCTTCATCG CTCTGGGCAT TCTGGCGGGA
GTGACCACGT TCGCGAGTCT CTGGCTTTGG CCCAAGGACG ATCCGGTGGA GGTTCCTCAT
ACCCACGGTG ATCTGAAAGA AGGCGATGAG CACCTGCAGA GCCCGGCCGT GGACGACGCT
CGGCAGCACT CACATGCATA CGTGATCGAC GACCAGCATC AGCGGTGGCC AAGGAGCTGA
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| Protein sequence | MLDVLANRTY RHLFFAQVIA LVGTGLATVA LGLLAFDLAG ADAGAVLGTA LAIKMVAYIG
VAPIASAFAD RVPRRTLLVA LDLVRAAVAL VLPFVTEIWQ VYVLIFVLQS ASAGFTPTFQ
ATIPDVLPKE ADYTKALSLS RLAYDLESLA SPALAAALLT VVSFHSLFLG TVVGFVASAV
LVVSTVLPKA KQPPRRSIYE RTTRGSRIYL STPRLRGLLA LNLAVASASA MVIVNTVVLV
QSQLQLNQRF TAGALAAFGG GSMLIALGLP KLLERLPDRR VMVFGASVLT IGLLLGPLAT
GNYAALVVLW LLLGMGYSLA QTPSGRLLRR SASEQDRPAL FAAQFALSHA CWLITYPVAG
WLGAKAGLNA SFIALGILAG VTTFASLWLW PKDDPVEVPH THGDLKEGDE HLQSPAVDDA
RQHSHAYVID DQHQRWPRS
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