Gene Rpic12D_4685 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRpic12D_4685 
Symbol 
ID8017263 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRalstonia pickettii 12D 
KingdomBacteria 
Replicon accessionNC_012855 
Strand
Start bp16424 
End bp16786 
Gene Length363 bp 
Protein Length120 aa 
Translation table11 
GC content56% 
IMG OID644828377 
Producttransposase IS3/IS911 
Protein accessionYP_002979577 
Protein GI241589552 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones11 
Plasmid unclonability p-value0.137823 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones27 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTCAACAA ACGGGTCGTA CCGGCGGCAT AGTCCGCAAT TCAAGTTGCA GCTATGTCAC 
GACATTCGTG ACGGCCGCAT TGGCCGTCGT GAGGCGCAGC GAACCTATCG AATTTCAGCC
AACCTCATTC AGATGTGGCT GAACCAGTTT GATCGCGGTG AGCTTGACAG TGAAGAAGTC
GCAGCGTCAA CGATCGCAGA ATACGAGGTC AAGATCGCTG CACTGGAACG CAAGGTGGGA
CAGCTCACCA TGGAAGTCGA CCTGCTAAAA AAAACGTCGC GCCTGCTGCT CGTCAGCAGC
AACGAGAACT CATCGATCGT GAGCGGCCCC TTCGTTGCTC CATCCGCCAG GGGTGCAACG
TGA
 
Protein sequence
MSTNGSYRRH SPQFKLQLCH DIRDGRIGRR EAQRTYRISA NLIQMWLNQF DRGELDSEEV 
AASTIAEYEV KIAALERKVG QLTMEVDLLK KTSRLLLVSS NENSSIVSGP FVAPSARGAT