Gene Rpic12D_3560 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRpic12D_3560 
Symbol 
ID8021247 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRalstonia pickettii 12D 
KingdomBacteria 
Replicon accessionNC_012857 
Strand
Start bp102444 
End bp103433 
Gene Length990 bp 
Protein Length329 aa 
Translation table11 
GC content67% 
IMG OID644832351 
Productmethane/phenol/toluene hydroxylase 
Protein accessionYP_002983492 
Protein GI241665133 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones16 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones26 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACAACGC AAGCTGAAGT CCTCAAGCCG CTCAAGACCT GGAGCCATCT GGCCGCGCGG 
CGACGCAAGC CCAGCGAGTA CGAAATCGTC TCGACCAACC TGCACTACAC CACCGACAAC
CCGGATGCGC CGTTCGAACT CGACCCGAAT TTCGAGATGG CGCAGTGGTT CAAGCGCAAC
CGCAACGCAT CGCCCCTGAC CCACCCCGAC TGGAACGCGT TCCGCGATCC GGATGAACTG
GTCTACCGCA CGTACAACAT GCTGCAGGAC GGGCAGGAGA CCTATGTGTT CGGGCTGCTC
GATCAGTTTT CCGAGCGCGG GCACGACGCC ATGCTCGAAC GCACCTGGGC CGGCACGCTG
GCACGCCTGT ACACGCCCGC GCGCTACCTG TTCCACACGC TGCAGATGGG CTCGGCCTAT
CTGACGCAAC TGGCGCCCGC CTCGACCATC TCGAACTGCG CGGCGTACCA GACGGCCGAT
TCGCTGCGCT GGCTGACACA CACCGCGTAC CGCACCAAGG AGCTGTCGCA GACCTTCAGC
GACCTCGGCT TCGGCACCGA TGAACGCCGC TACTGGGAGC AGGACCCGGC CTGGCAAGGC
TGGCGCAAGC TGGTCGAACA CGCGCTGGTG GCGTGGGACT GGGCCGAGTG CTTCGTTGCC
CTGAGCCTTG TGGTACGGCC GGCAGTGGAG GAAGCCGTCT TGCGCAGCCT CGGCGAAGCC
GCCCGGCATA ACGGCGACAC CTTGCTGGGC CTGCTGACCG ACGCGCAACT CGCCGATGCG
CAACGCCATC GGCGCTGGGC CGGCGCATTG GTGCGCATGG CGCTGGAGCA ACCCGGAAAC
CGCGAAGTCA TCACCGGTTG GCTCGCCAAG TGGGAGCCCC TGGCGGATGA AGCCATCGTG
GCCTACTGCG CGGCCCTGCC CGACGCGCCT GCGGCCCAGG CACGCGCAAC CGCTGCCGTG
CGCGAGTTCC GGCACAGCCT CGGCCTGTGA
 
Protein sequence
MTTQAEVLKP LKTWSHLAAR RRKPSEYEIV STNLHYTTDN PDAPFELDPN FEMAQWFKRN 
RNASPLTHPD WNAFRDPDEL VYRTYNMLQD GQETYVFGLL DQFSERGHDA MLERTWAGTL
ARLYTPARYL FHTLQMGSAY LTQLAPASTI SNCAAYQTAD SLRWLTHTAY RTKELSQTFS
DLGFGTDERR YWEQDPAWQG WRKLVEHALV AWDWAECFVA LSLVVRPAVE EAVLRSLGEA
ARHNGDTLLG LLTDAQLADA QRHRRWAGAL VRMALEQPGN REVITGWLAK WEPLADEAIV
AYCAALPDAP AAQARATAAV REFRHSLGL