Gene Rpic12D_3411 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRpic12D_3411 
Symbol 
ID8021096 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRalstonia pickettii 12D 
KingdomBacteria 
Replicon accessionNC_012856 
Strand
Start bp3601040 
End bp3601684 
Gene Length645 bp 
Protein Length214 aa 
Translation table11 
GC content66% 
IMG OID644832205 
Productputative aldolase 
Protein accessionYP_002983347 
Protein GI241664987 
COG category[G] Carbohydrate transport and metabolism 
COG ID[COG0235] Ribulose-5-phosphate 4-epimerase and related epimerases and aldolases 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones23 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones27 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAGTGCGT CTACCGAAAC GGCGCTACGT GAGGAGATCA CCCGCGTCGG ACAGAGTCTG 
TATGCCCGCG GTTACACCGT CGGCACGGCA GGCAACATCA GCGCGCGGCT GCCTGACGGC
TGGCTCATCA CGCCCACCGA TGCCTGCCTC GGCACGCTGG ACCCGGCACG TATCGCCAAG
GTGCTCGCGA CGGGCGAGTG GGTCGGAGGC GACAAGCCGT CGAAGACCCT CGCCCTGCAT
CGCGGCATCT ACGACCGCAA TGCGGAGGCG CATGCCGTGG TGCACACGCA TTCGACGCAT
CTCGTGGCAC TCACGCTGGC CGGCGTCTGG CATGACGCCG ATGTGCTGCC GCCCATCACG
CCGTACTACG TGATGAAGGT CGGCCACGTG CCGCTTATCG CGTATCGGCG ACCGGGCCAT
CCGGATGTGG CTGCACAGAT CGCTGCGCTG GCCAACGAGG TGCGCGCTGT GCTGCTCGAT
CGGCTTGGGC CCGTGGTGTG GCACGGCTCG GTGTCGAATG CCGCTTACGC GCTCGAAGAA
TTGGAAGAAA CCGCACGGCT TTGGTTGATG ACCGAACCCA AGCCGGCGCC GCTGTCCGAT
GCGCAGATCG ACGAACTGCG CCAGACGTTC GGAGCCCGTT GGTAG
 
Protein sequence
MSASTETALR EEITRVGQSL YARGYTVGTA GNISARLPDG WLITPTDACL GTLDPARIAK 
VLATGEWVGG DKPSKTLALH RGIYDRNAEA HAVVHTHSTH LVALTLAGVW HDADVLPPIT
PYYVMKVGHV PLIAYRRPGH PDVAAQIAAL ANEVRAVLLD RLGPVVWHGS VSNAAYALEE
LEETARLWLM TEPKPAPLSD AQIDELRQTF GARW