Gene Rpic12D_3287 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRpic12D_3287 
Symbol 
ID8020971 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRalstonia pickettii 12D 
KingdomBacteria 
Replicon accessionNC_012856 
Strand
Start bp3468977 
End bp3470182 
Gene Length1206 bp 
Protein Length401 aa 
Translation table11 
GC content67% 
IMG OID644832082 
ProductOxidoreductase FAD-binding domain protein 
Protein accessionYP_002983225 
Protein GI241664865 
COG category[C] Energy production and conversion 
COG ID[COG1017] Hemoglobin-like flavoprotein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones12 
Plasmid unclonability p-value0.888577 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones38 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCTGTCCG ACAAGTCCAA GCCTTACATC GATGCCAGCG TTCCGGTGCT GCGCGAGCAT 
GGCTTGACCA TCACCCAGAC CTTCTATCGC AACATGTTCG CCAGCCACCC CGAGCTGACC
AACGTGTTCA ACATGGGCAA CCAGGCCAAT GGGTCGCAGC AGCAGTCGCT GGCTTCGGCG
GTGTTTGCGT ACGCCGCCAA CCATGGCAAC AACGCGGCGC TGGCGCCCGT GGTCAACCGC
ATCGTGCACA AGCACGCCGC TGTGGGCATC AAGCCGAGCC ACTACCCGAT CGTCGCGCGC
CACCTGCTGG GCGCAATTGC CGAAGTGCTG GGCGACGCCG CCACACCAGA CCTGCTCGCC
GCCTGGGACG AGGCCTACTG GCTGCTCGCC GCCGAGCTGA TCGCGGCTGA AGCGCGCCTG
TATCAGCACA CCGGCAGCGG GCCCGACCAT CGTCAGCCGG TGCGCATTGT CAGCCGCCGC
CAACAGGCCG AAGATGTAGT GTCGCTCACT CTCGAAGCGG TGGGGGATGC GCCGTTGGCC
GATTTCCTGC CGGGTCAATA CATCTCGGTG CAGGTGGAGC TGGCGCCGGG CGCACTGCAG
CAGCGTCAGT ACAGCCTGTC GGATGCGCCG AATGGCCGCA CGTGGCGCAT CTCGGTCAAG
CGTGATGCGG GTGACGCCGA TCGCCCTGCG GGCACCGTGT CGAGCTGGCT GCACGCCAAT
GCGCGCGAAG GCGACGTCCT GCTGGTCAGC CAACCCTACG GTGACTTCGT GCCGCAACTG
GCGACCAGCA ACCCGATCGT GCTGATGTCG GCTGGTGTTG GCATCACGCC CATGATCTCG
GCGCTCAACA CGCTCGCGCA GCAGAACAGC GCGCGCAAGA TCGTATTCAG CCACGCCAGT
CGCGCGGCCT CGCATGTTGC CCACGCCGAC GATCTGGAGC GTGCCGCACA AGCGCTGCCT
GCATTCGAGG CGCACGTATT CCTGGAGTCC GGCGAAGACG CGGAATTCGC GCAGCGCCCG
GCCCACCCCG GCCGCATGAC GGTCGACACG TTCGTGCGCG ACCACGGGGC GGAAGCGGAC
TTCTATCTCT GCGGCCCGCT GCCGTTCATG CAGGCACAGC GTGCGGCGCT GCTCGCCAGC
GGCGTGCCGT CGGAGCGCAT CCACCGCGAA GTGTTCGGCC CCGATCTGCT GGACGACATC
CTCTGA
 
Protein sequence
MLSDKSKPYI DASVPVLREH GLTITQTFYR NMFASHPELT NVFNMGNQAN GSQQQSLASA 
VFAYAANHGN NAALAPVVNR IVHKHAAVGI KPSHYPIVAR HLLGAIAEVL GDAATPDLLA
AWDEAYWLLA AELIAAEARL YQHTGSGPDH RQPVRIVSRR QQAEDVVSLT LEAVGDAPLA
DFLPGQYISV QVELAPGALQ QRQYSLSDAP NGRTWRISVK RDAGDADRPA GTVSSWLHAN
AREGDVLLVS QPYGDFVPQL ATSNPIVLMS AGVGITPMIS ALNTLAQQNS ARKIVFSHAS
RAASHVAHAD DLERAAQALP AFEAHVFLES GEDAEFAQRP AHPGRMTVDT FVRDHGAEAD
FYLCGPLPFM QAQRAALLAS GVPSERIHRE VFGPDLLDDI L