Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Rpic12D_3287 |
Symbol | |
ID | 8020971 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Ralstonia pickettii 12D |
Kingdom | Bacteria |
Replicon accession | NC_012856 |
Strand | + |
Start bp | 3468977 |
End bp | 3470182 |
Gene Length | 1206 bp |
Protein Length | 401 aa |
Translation table | 11 |
GC content | 67% |
IMG OID | 644832082 |
Product | Oxidoreductase FAD-binding domain protein |
Protein accession | YP_002983225 |
Protein GI | 241664865 |
COG category | [C] Energy production and conversion |
COG ID | [COG1017] Hemoglobin-like flavoprotein |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 12 |
Plasmid unclonability p-value | 0.888577 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 38 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGCTGTCCG ACAAGTCCAA GCCTTACATC GATGCCAGCG TTCCGGTGCT GCGCGAGCAT GGCTTGACCA TCACCCAGAC CTTCTATCGC AACATGTTCG CCAGCCACCC CGAGCTGACC AACGTGTTCA ACATGGGCAA CCAGGCCAAT GGGTCGCAGC AGCAGTCGCT GGCTTCGGCG GTGTTTGCGT ACGCCGCCAA CCATGGCAAC AACGCGGCGC TGGCGCCCGT GGTCAACCGC ATCGTGCACA AGCACGCCGC TGTGGGCATC AAGCCGAGCC ACTACCCGAT CGTCGCGCGC CACCTGCTGG GCGCAATTGC CGAAGTGCTG GGCGACGCCG CCACACCAGA CCTGCTCGCC GCCTGGGACG AGGCCTACTG GCTGCTCGCC GCCGAGCTGA TCGCGGCTGA AGCGCGCCTG TATCAGCACA CCGGCAGCGG GCCCGACCAT CGTCAGCCGG TGCGCATTGT CAGCCGCCGC CAACAGGCCG AAGATGTAGT GTCGCTCACT CTCGAAGCGG TGGGGGATGC GCCGTTGGCC GATTTCCTGC CGGGTCAATA CATCTCGGTG CAGGTGGAGC TGGCGCCGGG CGCACTGCAG CAGCGTCAGT ACAGCCTGTC GGATGCGCCG AATGGCCGCA CGTGGCGCAT CTCGGTCAAG CGTGATGCGG GTGACGCCGA TCGCCCTGCG GGCACCGTGT CGAGCTGGCT GCACGCCAAT GCGCGCGAAG GCGACGTCCT GCTGGTCAGC CAACCCTACG GTGACTTCGT GCCGCAACTG GCGACCAGCA ACCCGATCGT GCTGATGTCG GCTGGTGTTG GCATCACGCC CATGATCTCG GCGCTCAACA CGCTCGCGCA GCAGAACAGC GCGCGCAAGA TCGTATTCAG CCACGCCAGT CGCGCGGCCT CGCATGTTGC CCACGCCGAC GATCTGGAGC GTGCCGCACA AGCGCTGCCT GCATTCGAGG CGCACGTATT CCTGGAGTCC GGCGAAGACG CGGAATTCGC GCAGCGCCCG GCCCACCCCG GCCGCATGAC GGTCGACACG TTCGTGCGCG ACCACGGGGC GGAAGCGGAC TTCTATCTCT GCGGCCCGCT GCCGTTCATG CAGGCACAGC GTGCGGCGCT GCTCGCCAGC GGCGTGCCGT CGGAGCGCAT CCACCGCGAA GTGTTCGGCC CCGATCTGCT GGACGACATC CTCTGA
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Protein sequence | MLSDKSKPYI DASVPVLREH GLTITQTFYR NMFASHPELT NVFNMGNQAN GSQQQSLASA VFAYAANHGN NAALAPVVNR IVHKHAAVGI KPSHYPIVAR HLLGAIAEVL GDAATPDLLA AWDEAYWLLA AELIAAEARL YQHTGSGPDH RQPVRIVSRR QQAEDVVSLT LEAVGDAPLA DFLPGQYISV QVELAPGALQ QRQYSLSDAP NGRTWRISVK RDAGDADRPA GTVSSWLHAN AREGDVLLVS QPYGDFVPQL ATSNPIVLMS AGVGITPMIS ALNTLAQQNS ARKIVFSHAS RAASHVAHAD DLERAAQALP AFEAHVFLES GEDAEFAQRP AHPGRMTVDT FVRDHGAEAD FYLCGPLPFM QAQRAALLAS GVPSERIHRE VFGPDLLDDI L
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