| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rpic12D_3279 |
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| Symbol | |
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| ID | 8020963 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Ralstonia pickettii 12D |
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| Kingdom | Bacteria |
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| Replicon accession | NC_012856 |
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| Strand | + |
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| Start bp | 3462464 |
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| End bp | 3463591 |
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| Gene Length | 1128 bp |
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| Protein Length | 375 aa |
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| Translation table | 11 |
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| GC content | 62% |
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| IMG OID | 644832074 |
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| Product | porin Gram-negative type |
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| Protein accession | YP_002983217 |
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| Protein GI | 241664857 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG3203] Outer membrane protein (porin) |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 20 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 31 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGTCCCGCA TCAAGTTTGC CCTTGCGGCA ACTGCAGCTG CCGCGGCCAC GCTGGCCGCC
AGCGCCGCCC ATGCCCAGTC AAACGTGACG CTTTACGGCC TGATCGACAC CACCATCAGC
ACCGTCAACA ACACCAACGC CGCGGGCGCA CGCACCACCG GTTTCCAGGT GCCTTGGTTC
TCGGGCAGCC GCTGGGGCCT GACCGGCAAG GAAAACCTGG GCGGCGGTAC GTCGGCCATC
TTCAAGCTGG AATCGGAATT CGAGACGCCG ACCGGCAACA TGGACACCCC GGGCGTGTTG
TTCAACCGCG ACGCCTGGGT GGGTCTGTCG AGCGAATCGC TGGGCAAGCT GACCTTCGGC
CGCCAGAACG CGATTGCGCG TGACATCTCT GGCATCTACG GCGACCCGTA CGGCAGCGCT
AGCGTCACGC TGGATGAAGG CGGCTACACC AACGTCAACA ACTTCAAGCA ACTGATCTTC
TACGCAGGCA GCGCAACGGG CACACGTCTG AACAACGGCG TAGTGTGGAA GAAGCTGTGG
GATGGCCGCT TCTTTACCGG CTTGGCCTAT CAGTTTGGCG AAGTGCCGGG CCAGTTCACG
CAAGGCACCA CCGAATCGTT GGCGCTGGGC TACAACGGCG ACAACTTCCA CCTCGCAGGC
TTCGCGCAAC AAGCGAAGGT CAACGGCTTC ATGGACCGCT CGTACTCGGT GGGCGGCAAC
GTGATCTTCG GCATGTTCCG CGTGAACGCC GGCTACTTCC ACTACACCGG CGAGCAACCG
GCCGCACTGG GCAACCGCAA GGACGACGCC TACACCGTGT CGCTGAAGAT CGCTCCGCAA
GGCGCCTTCG ACTACGAAAT CGGCTACCAG ATCATGAAGG CCGGCAACGC CGCGTTCAGC
GCCGATGGCA ACACGCTCAA CGCTTATGCC AACGTCGCGG GTGCCACGGC AGCGGGCAGC
GGCCGCAAGA ACACGCTGTA CGGTTCGGTG TTCTACCACG TGTCCAAGCG CACGGAGTTC
TACGTCGCGG CTGACTACAT GAAGCTGAAA GATCAGTACA TCGTGGGCGG CACCAACGGC
CACAACAGCC AGACGGAGTT CGCCGTCGGT ATGCGCACGC GCTTCTAA
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| Protein sequence | MSRIKFALAA TAAAAATLAA SAAHAQSNVT LYGLIDTTIS TVNNTNAAGA RTTGFQVPWF
SGSRWGLTGK ENLGGGTSAI FKLESEFETP TGNMDTPGVL FNRDAWVGLS SESLGKLTFG
RQNAIARDIS GIYGDPYGSA SVTLDEGGYT NVNNFKQLIF YAGSATGTRL NNGVVWKKLW
DGRFFTGLAY QFGEVPGQFT QGTTESLALG YNGDNFHLAG FAQQAKVNGF MDRSYSVGGN
VIFGMFRVNA GYFHYTGEQP AALGNRKDDA YTVSLKIAPQ GAFDYEIGYQ IMKAGNAAFS
ADGNTLNAYA NVAGATAAGS GRKNTLYGSV FYHVSKRTEF YVAADYMKLK DQYIVGGTNG
HNSQTEFAVG MRTRF
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