Gene Rpic12D_3167 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRpic12D_3167 
Symbol 
ID8020851 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRalstonia pickettii 12D 
KingdomBacteria 
Replicon accessionNC_012856 
Strand
Start bp3343321 
End bp3343836 
Gene Length516 bp 
Protein Length171 aa 
Translation table11 
GC content66% 
IMG OID644831963 
ProductGCN5-related N-acetyltransferase 
Protein accessionYP_002983106 
Protein GI241664746 
COG category[M] Cell wall/membrane/envelope biogenesis 
COG ID[COG1247] Sortase and related acyltransferases 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones18 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones30 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCTGCTCC GCGACGCAAC GCAGGCCGAC CTTCCGGCCA TCCTCGCCAT CTACAACGAC 
GTGATCGCCA ACTCCAACGC GATCTACACC GAAACACCCG TCACGCTGGA AGACCGCACC
GCGTGGCTAG CCTTGCGTGC CACGCAGGGT TATCCGGTGC TGGTCGCCGA CGATGATAGG
CAGGTGGCAG GCGTTGCATC GTTTGGGGAT TTCCGGCCCC ACCCGGGCTT TCGCACCACC
GTCGAGCACT CGGTGCACAT ACACCGCGAC TGGCGTGGCC AGGGGCTGGG CAGTCGGCTG
GTCGAGGCGC TGTGCGAACG TGCCGCTGCC CTGGGCAAGC ACCTGATGGT GGGCGCCATC
GACGGTGGCA ATGCGGGCTC GATTCGCCTG CATGAAAAGC TCGGCTTCAA GGAAGTGGGC
CGCATGCCCG AGGCCGCCAT CAAGCACGGT CAGTGGCTCG ACCTCGTGTT CATGCAGCGC
TGGCTGGAAG CGCCGGGAAC GGTCCGAAGC GACTGA
 
Protein sequence
MLLRDATQAD LPAILAIYND VIANSNAIYT ETPVTLEDRT AWLALRATQG YPVLVADDDR 
QVAGVASFGD FRPHPGFRTT VEHSVHIHRD WRGQGLGSRL VEALCERAAA LGKHLMVGAI
DGGNAGSIRL HEKLGFKEVG RMPEAAIKHG QWLDLVFMQR WLEAPGTVRS D