Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Rpic12D_3087 |
Symbol | |
ID | 8020770 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Ralstonia pickettii 12D |
Kingdom | Bacteria |
Replicon accession | NC_012856 |
Strand | - |
Start bp | 3260897 |
End bp | 3262213 |
Gene Length | 1317 bp |
Protein Length | 438 aa |
Translation table | 11 |
GC content | 63% |
IMG OID | 644831883 |
Product | hypothetical protein |
Protein accession | YP_002983027 |
Protein GI | 241664667 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 18 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 50 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGGGACACC GACGCACGGC AGTGGCGTGG GCAGTGGCAT GTTGGTCGTT GCTTCCTGCG GCGGCCGAAG CGCAATCGGC ACCGGCTGCC GCAGACTCCT TTGACGCGCG CCTGGCGCGC CTGCAGCGCA TCATCGAGCG GCAGCAGAAG ATCATTGATG CATTGGAAGA GCGCGTCGGC GACCTGGAGC TGGTGCGCGT GCGCGGGCGT GGCGTCGGTG CCGGCAACGC ACAGGCATCC GCTGCGGGCG CAACCACGGC AACACAATCG CCGTCGTCTG CGCTGGTCGC CCAATCCGGC AACACGGCGC CCGCGTCGGA AAGCACAACC GCCGCGCGCC CCGACCCCAA CGACAAGCCT CGCATCCAGA GCAAGGACCT CGTCTTCCAA TCCGAGCACG CGCCGCTGTT TGAGCGACGT TTCACAATCG ATACCGGCAT CAGCTACAGC TACTACGACC GCCGCAACCT CGCGCTGTCG GGCTTTCTGG CGCTGGATGC GATCTTTCTC GGGCAGATCA ACCTGGTCCA GACCAAGGCC AATGTCACGA CCTTCGACGT CACCGGCCGC TATGGCTTCA GCGATCGGCT GAGCGCGGAT TTCACAGTGC CGGCCGTGTA TCGCTCCAGC ACGTTCTTCA GCGGCGGTGC GGGTGGGGCA TCGAGCACCG TCAGCGAGGC AGACAAGACG TCCGCGGGCT TGGGCGATGT GAGTGCCGGC ATCTACTATC AGCTCGTCAA GGAGTCAGCG GATTTGCCGG ACATTGTCGG CAGCTTTCGC GTGCGTGCAC CGACCGGGCG TTCACCGTTC GGCATCAAGC TGATCCATGC CGACAGCAAT AACAACAACC TGATCATCGA CCAGCAACTG CCGACCGGCA ACGGTGTATG GAGCGGCACG CTGGGCATGT CTTTCCTGAA GACGTACGAC CCGGTGGTGT TGTTTGCCAA TGCCAGCTAC ACGTACTACG TGCCGCGCTC GTTTGCCGAC ATCTCCTCGA CCGAAGGCGT GGTGCAGCCG GGCAAAGTCA AGCTGGGCGA TACCATCACT TTGGGCGGAG GCCTTGCATT GGCGCTGAAC GACCGCACGG CGCTGACGAT GGCTTACAGC ACGGCATTCT CCGGCAACAC GCGCATCACC CCAGAGGGCG GCGCCGAACA GTCGGTGGTG GGCAGCAAAA CCAACGTAGG CACGATGACG TTCGGCATCA GCCATGTGCT GACCAAGAAC TTGTCGATCA GCGCCACGCT GGCCATGGGC CTGACGCCGG ACGCGCCGAA CTACGTCTTT ACGCTTCGCT TCCCGTACAC GTGGTAG
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Protein sequence | MGHRRTAVAW AVACWSLLPA AAEAQSAPAA ADSFDARLAR LQRIIERQQK IIDALEERVG DLELVRVRGR GVGAGNAQAS AAGATTATQS PSSALVAQSG NTAPASESTT AARPDPNDKP RIQSKDLVFQ SEHAPLFERR FTIDTGISYS YYDRRNLALS GFLALDAIFL GQINLVQTKA NVTTFDVTGR YGFSDRLSAD FTVPAVYRSS TFFSGGAGGA SSTVSEADKT SAGLGDVSAG IYYQLVKESA DLPDIVGSFR VRAPTGRSPF GIKLIHADSN NNNLIIDQQL PTGNGVWSGT LGMSFLKTYD PVVLFANASY TYYVPRSFAD ISSTEGVVQP GKVKLGDTIT LGGGLALALN DRTALTMAYS TAFSGNTRIT PEGGAEQSVV GSKTNVGTMT FGISHVLTKN LSISATLAMG LTPDAPNYVF TLRFPYTW
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