Gene Rpic12D_3087 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRpic12D_3087 
Symbol 
ID8020770 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRalstonia pickettii 12D 
KingdomBacteria 
Replicon accessionNC_012856 
Strand
Start bp3260897 
End bp3262213 
Gene Length1317 bp 
Protein Length438 aa 
Translation table11 
GC content63% 
IMG OID644831883 
Producthypothetical protein 
Protein accessionYP_002983027 
Protein GI241664667 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones18 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones50 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGGACACC GACGCACGGC AGTGGCGTGG GCAGTGGCAT GTTGGTCGTT GCTTCCTGCG 
GCGGCCGAAG CGCAATCGGC ACCGGCTGCC GCAGACTCCT TTGACGCGCG CCTGGCGCGC
CTGCAGCGCA TCATCGAGCG GCAGCAGAAG ATCATTGATG CATTGGAAGA GCGCGTCGGC
GACCTGGAGC TGGTGCGCGT GCGCGGGCGT GGCGTCGGTG CCGGCAACGC ACAGGCATCC
GCTGCGGGCG CAACCACGGC AACACAATCG CCGTCGTCTG CGCTGGTCGC CCAATCCGGC
AACACGGCGC CCGCGTCGGA AAGCACAACC GCCGCGCGCC CCGACCCCAA CGACAAGCCT
CGCATCCAGA GCAAGGACCT CGTCTTCCAA TCCGAGCACG CGCCGCTGTT TGAGCGACGT
TTCACAATCG ATACCGGCAT CAGCTACAGC TACTACGACC GCCGCAACCT CGCGCTGTCG
GGCTTTCTGG CGCTGGATGC GATCTTTCTC GGGCAGATCA ACCTGGTCCA GACCAAGGCC
AATGTCACGA CCTTCGACGT CACCGGCCGC TATGGCTTCA GCGATCGGCT GAGCGCGGAT
TTCACAGTGC CGGCCGTGTA TCGCTCCAGC ACGTTCTTCA GCGGCGGTGC GGGTGGGGCA
TCGAGCACCG TCAGCGAGGC AGACAAGACG TCCGCGGGCT TGGGCGATGT GAGTGCCGGC
ATCTACTATC AGCTCGTCAA GGAGTCAGCG GATTTGCCGG ACATTGTCGG CAGCTTTCGC
GTGCGTGCAC CGACCGGGCG TTCACCGTTC GGCATCAAGC TGATCCATGC CGACAGCAAT
AACAACAACC TGATCATCGA CCAGCAACTG CCGACCGGCA ACGGTGTATG GAGCGGCACG
CTGGGCATGT CTTTCCTGAA GACGTACGAC CCGGTGGTGT TGTTTGCCAA TGCCAGCTAC
ACGTACTACG TGCCGCGCTC GTTTGCCGAC ATCTCCTCGA CCGAAGGCGT GGTGCAGCCG
GGCAAAGTCA AGCTGGGCGA TACCATCACT TTGGGCGGAG GCCTTGCATT GGCGCTGAAC
GACCGCACGG CGCTGACGAT GGCTTACAGC ACGGCATTCT CCGGCAACAC GCGCATCACC
CCAGAGGGCG GCGCCGAACA GTCGGTGGTG GGCAGCAAAA CCAACGTAGG CACGATGACG
TTCGGCATCA GCCATGTGCT GACCAAGAAC TTGTCGATCA GCGCCACGCT GGCCATGGGC
CTGACGCCGG ACGCGCCGAA CTACGTCTTT ACGCTTCGCT TCCCGTACAC GTGGTAG
 
Protein sequence
MGHRRTAVAW AVACWSLLPA AAEAQSAPAA ADSFDARLAR LQRIIERQQK IIDALEERVG 
DLELVRVRGR GVGAGNAQAS AAGATTATQS PSSALVAQSG NTAPASESTT AARPDPNDKP
RIQSKDLVFQ SEHAPLFERR FTIDTGISYS YYDRRNLALS GFLALDAIFL GQINLVQTKA
NVTTFDVTGR YGFSDRLSAD FTVPAVYRSS TFFSGGAGGA SSTVSEADKT SAGLGDVSAG
IYYQLVKESA DLPDIVGSFR VRAPTGRSPF GIKLIHADSN NNNLIIDQQL PTGNGVWSGT
LGMSFLKTYD PVVLFANASY TYYVPRSFAD ISSTEGVVQP GKVKLGDTIT LGGGLALALN
DRTALTMAYS TAFSGNTRIT PEGGAEQSVV GSKTNVGTMT FGISHVLTKN LSISATLAMG
LTPDAPNYVF TLRFPYTW