Gene Rpic12D_2127 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRpic12D_2127 
Symbol 
ID8019788 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRalstonia pickettii 12D 
KingdomBacteria 
Replicon accessionNC_012856 
Strand
Start bp2268478 
End bp2269086 
Gene Length609 bp 
Protein Length202 aa 
Translation table11 
GC content64% 
IMG OID644830908 
Productcytochrome c class I 
Protein accessionYP_002982073 
Protein GI241663713 
COG category[C] Energy production and conversion 
COG ID[COG2010] Cytochrome c, mono- and diheme variants 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones10 
Plasmid unclonability p-value0.169346 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones28 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCTGAACG ACAAGTCCGC CCCCCGGCCA ACCCCGCAAG AGGAGCGGGA GCATGCCGAG 
CCCGGTGAAT CCCAGACTCC TATTCCCCTG GGCATCAAGC TGCTGGTTGC GGCGCTTGTT
GTGTGGGGAA TCTATTACAT CGCGAATTCC CCGATCAACG TCCCTGCCAG TCTTGGGGAC
AGCCGGACCG TGGCCGATCT TGAAAAAGGG AAAGCGGGAG GCGGCGGCGC TACTGACGGC
GCGGCGCTGT TCGCTTCACG CTGCGCGGCC TGCCATCAGG CGGCGGGGCA AGGCTTGCCC
GGGGTGTTCC CCCCGTTGGC CGGCTCGGAA TGGGTGCAAG GGCGCCCCGA GACCGTGGCG
GCCATTGTGT TGCACGGCAT CACTGGCCCG CTGACCGTCA AGGGCGCCAA GTTCAATGGC
GCGATGCCCT CGTTCAGCGA CCAGCTCAGC GACGCCGAGA TTGCGGCCGT GTTGGGTTAT
GTGAGGAGCC AGTGGGGCAA CGCTGCGCCA CCCATCCTCG CGCAAGCGGT CACCCAGGTG
CGCGATGCGA CCAAAGAAAA AACCGCTCCT TATAACGGAG ACGACGAACT GGGCAAGCTC
AAGTGGTAA
 
Protein sequence
MLNDKSAPRP TPQEEREHAE PGESQTPIPL GIKLLVAALV VWGIYYIANS PINVPASLGD 
SRTVADLEKG KAGGGGATDG AALFASRCAA CHQAAGQGLP GVFPPLAGSE WVQGRPETVA
AIVLHGITGP LTVKGAKFNG AMPSFSDQLS DAEIAAVLGY VRSQWGNAAP PILAQAVTQV
RDATKEKTAP YNGDDELGKL KW