Gene Rpic12D_1949 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRpic12D_1949 
Symbol 
ID8019607 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRalstonia pickettii 12D 
KingdomBacteria 
Replicon accessionNC_012856 
Strand
Start bp2075172 
End bp2076005 
Gene Length834 bp 
Protein Length277 aa 
Translation table11 
GC content66% 
IMG OID644830734 
Productprotein of unknown function DUF6 transmembrane 
Protein accessionYP_002981902 
Protein GI241663542 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.0296573 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones17 
Fosmid unclonability p-value0.100068 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGACCCCCG CCGTTATCGC CCTGGTTCTC TGCGCCGCCC TGCTCCACGC TTCATGGAAT 
GCACTGCTGA AAAGCGGCGC GGACCGCCTG CGCGCTATCA CGCTGATGAC ACTGGCTTCC
GGCGTGGCAG CACTACCGAT GGCGATTGCA TTGCCATTGC CCGCACCGGC CGCGTGGCCG
TATGTGGCGC TGTCCGCGGT ACTGCACGTC GGCTACAACG TGTTCCTCGC GCGCGCGTAT
CGGTTTGGCG AGTTCGGCCA GGTGTACCCG ATTGCGCGCG GCTCATCACC GCTGCTCGTA
ACGGTGGGCG CCGCGCTCTT CGCGGGCGAA ATGCCTGGCG TGATTGCACT CACGGGCGTA
GTGCTGGTGA GCGGCGGCAT TCTCAGTCTG GCGCGCGGCC GGAAGGCCGA TCTTGGCTCG
ACGCTGGCGG CACTCACCAC CGGCGTATTC ATCGCGTGCT ACACGGTGTG CGACGGCATC
GGCGCGCGCG TCGCCGGCAA TGCGAATGCG TACTCGGCAT GGTTGTTCAT GCTCGACGGC
CTGCCGATGG TGCTGCTCTA TCGCGTGTGG AAAGGCCCGT TGAACATCGG CCTGCGCGAC
GTCAACACAC TCAAGACGTT TGGCGGCGGC GTGGTCTCCC TTGTCGCCTA CGGCATCGTC
ATCTGGGCCG TGACGCTCGC GCCGATGGGG CCGGTGTCGG CCCTGCGCGA AACGTCGGTC
GTGTTTGCTG CGCTGCTCGG CCGACTGTTC CTGAAAGAAT CGCTCACCGC ACGGCGCGTG
TCGGCCTGCT CGGTCATCGC CTTTGGCGCT TACTGCCTGG GGCACCCGGC CTGA
 
Protein sequence
MTPAVIALVL CAALLHASWN ALLKSGADRL RAITLMTLAS GVAALPMAIA LPLPAPAAWP 
YVALSAVLHV GYNVFLARAY RFGEFGQVYP IARGSSPLLV TVGAALFAGE MPGVIALTGV
VLVSGGILSL ARGRKADLGS TLAALTTGVF IACYTVCDGI GARVAGNANA YSAWLFMLDG
LPMVLLYRVW KGPLNIGLRD VNTLKTFGGG VVSLVAYGIV IWAVTLAPMG PVSALRETSV
VFAALLGRLF LKESLTARRV SACSVIAFGA YCLGHPA