Gene Rpic12D_1885 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRpic12D_1885 
Symbol 
ID8019541 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRalstonia pickettii 12D 
KingdomBacteria 
Replicon accessionNC_012856 
Strand
Start bp2001681 
End bp2004032 
Gene Length2352 bp 
Protein Length783 aa 
Translation table11 
GC content63% 
IMG OID644830668 
ProductNADH dehydrogenase subunit G 
Protein accessionYP_002981838 
Protein GI241663478 
COG category[C] Energy production and conversion 
COG ID[COG1034] NADH dehydrogenase/NADH:ubiquinone oxidoreductase 75 kD subunit (chain G) 
TIGRFAM ID[TIGR01973] NADH-quinone oxidoreductase, chain G 


Plasmid Coverage information

Num covering plasmid clones10 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones20 
Fosmid unclonability p-value0.441319 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGTTGAAA TCGAAATTGA TGGCAAGAAG GTCGAGGTTG CCGAAGGCAG CCTGGTGATG 
GAGGCGGCCC GCCAGACGGG CACCTACATT CCTCACTTTT GCTATCACCG CAAACTGTCG
GTCGCGGCCA ACTGCCGGAT GTGCCTGGTC GAGGTCGAGA AGGCGCCCAA GGCGCTGCCG
GCCTGCGCCA CGCCCGTCAC CGCGGGCATG AAGGTCTTCA CAAATTCCGA GAAGGCGGTG
AAGGCGCAGA AGTCCGTGAT GGAGTTCCTG CTGATCAACC ACCCGCTGGA TTGCCCGATC
TGTGACCAGG GCGGCGAGTG CCAGTTGCAG GACTTGGCCG TGGGCTACGG CAAGTCTGAA
TCGCGCTACC AGGAAGAAAA GCGTGTGGTG TTCCACAAGA ATGTGGGCCC GCTGATCTCC
ATGGAAGAGA TGACGCGCTG CATTCACTGC ACGCGCTGCG TCCGTTTCGG CCAGGAAATT
GCCGGCGTGA TGGAACTGGG CATGCTCAAC CGAGGCGAGC ATTCCGAGAT CACGACGTTC
GTCGGGCAAA CCGTTGACTC CGAGTTGTCG GGCAACATGA TCGATCTGTG CCCCGTTGGC
GCACTGACCA GCAAGCCGTT CCGCTATTCC GCTCGTACGT GGGAGCTGGC ACGCCGCAAG
TCGGTGTCGC CGCACGATGG CCTGGGCGCT AACGTGATCG TCCAGACGAA GAATCAGCGC
GTGATGCGCG TTCTTCCGCT GGACAACGAA GCCATCAACG AATGCTGGCT TTCCGATAAG
GATCGTTTCG CCTATGAGGG CGTGAACAGC GATGACCGCC TGACCCAACC GATGCTCAAG
CAAGGTGGTC AATGGAAGGC TGTCGACTGG ACTACCGCAC TGGAGTACGT TGCCAACGGC
CTGAACGAAA TCAAGCGTGA CCACGGCGCA GAGCAGATTG GTGCATTGGC CAGCCCACAC
AGCACGCTTG AAGAGCTGTT CCTGCTGCAA AAGCTGGTGC GCGGCATTGG CAGCGACAAC
GTCGACTTCC GTTTGCGTCA GTCCGATTTC TCGGTCAAGC CAACGGGCGC TCCGTGGCTC
GGCATGCCGA TCGCCGACGT GTCGCTGCTG CAGCGTACGC TGGTCGTAGG CTCTTTCCTG
CGCAAGGATC ACCCACTGCT GGCCGCGCGT CTGCGTCAGG CAGGCAAGAA GGGTGCGCAA
CTGAGCATGA TCGGCGCAGG TGGCGAGGAT CTGCTGATGC CTGCCACGCA ACTGTTGGGC
GCACCGTCGC AATGGCTGTC GCTGCTGTCG CAAGTGGCGG TGGCCGTGGC GGCTGCCAAT
AATGTTGCCC GTCCAGGCGG CACCGATGGC ATCGAAGCCG GTGACATTGC CCAGCGCATC
GCCGCAAGCC TCGCTTCGGG CGAGCGCAAG GCTGTGTTCC TCGGCAACGC CGCCGTGGCG
CACCCGCAGT TTTCGCAACA GCACGCGTTG GCCCAGTGGG TCGCGCAGCA GACCGGCGCG
ACGCTTGGCT TCCTGACGGA AGCAGCCAAC ACGGTTGGTG GCTACATCGC CGGGGCGCTC
CCCCAAGGCA ACGGCTTGGA CGCCGCCGCC ATGTTGGCGC AACCGCGTCG CGCTTACGTG
CTGTTGGGCG CCGAACCGGA ATTCGATACC GCCAACCCCA CGCAAGCGCG TGCCGCGCTG
GACCAGGCCG ACACCGTGAT CGTGCTTGCA CCGTTTGCCT CTCGCGCCGC GCTTGAGTAC
GCGGACGTGC TGCTGCCGAC GGCTCCGTTC ACCGAAACCT CGGGCACGTT CATCAACTGC
GAGGGATTGC CACAAAGCTT CAATGGCGTT GTGCGCGGCC TGGGTGACTC GCGTCCCGCC
TGGAAGGTCC TGCGCGTGCT GGGCAACCTG CTGAACGTGT CTGGCTTTGA GTACGACAGT
TCGGAAGTGG TGCGCGACGA AGTGCTGGCC AAGCCGGTCA TCGAGCGTTT GTCGAACGCG
ACGATTGCGC AGACCGCCGC CCCTGTTGCT ACTGCGGCAG GCATCGAGCG TCTGGCCGAT
GTGCCGATTT ACCACGCCGA TCCGATCGTG CGCCGCGCCG GTTCGCTGCA ACTGACGGCT
GCAGCACGTG CTGCCGTGCG TGCTGGCTTG CCGGCTGATC TCTACGCACA ACTGGGCCTG
GCCAATGGTG ACGCCGTGCG CGTGACGCAA GGGCAGCGCA GTGTGGTGCT GCCGGCCGTG
CTGGACAAGT CGCTGGCTTC TGGCGTGATC CGCGTGCCGG CCGCTACCGA AGCGTCGGCG
CAGCTGGGTG CCATGTTCGG TGCGGTAAGC GTTGAGAAGG TTGAATCGTC CGCGCTGGCG
GCTACGGTGT AA
 
Protein sequence
MVEIEIDGKK VEVAEGSLVM EAARQTGTYI PHFCYHRKLS VAANCRMCLV EVEKAPKALP 
ACATPVTAGM KVFTNSEKAV KAQKSVMEFL LINHPLDCPI CDQGGECQLQ DLAVGYGKSE
SRYQEEKRVV FHKNVGPLIS MEEMTRCIHC TRCVRFGQEI AGVMELGMLN RGEHSEITTF
VGQTVDSELS GNMIDLCPVG ALTSKPFRYS ARTWELARRK SVSPHDGLGA NVIVQTKNQR
VMRVLPLDNE AINECWLSDK DRFAYEGVNS DDRLTQPMLK QGGQWKAVDW TTALEYVANG
LNEIKRDHGA EQIGALASPH STLEELFLLQ KLVRGIGSDN VDFRLRQSDF SVKPTGAPWL
GMPIADVSLL QRTLVVGSFL RKDHPLLAAR LRQAGKKGAQ LSMIGAGGED LLMPATQLLG
APSQWLSLLS QVAVAVAAAN NVARPGGTDG IEAGDIAQRI AASLASGERK AVFLGNAAVA
HPQFSQQHAL AQWVAQQTGA TLGFLTEAAN TVGGYIAGAL PQGNGLDAAA MLAQPRRAYV
LLGAEPEFDT ANPTQARAAL DQADTVIVLA PFASRAALEY ADVLLPTAPF TETSGTFINC
EGLPQSFNGV VRGLGDSRPA WKVLRVLGNL LNVSGFEYDS SEVVRDEVLA KPVIERLSNA
TIAQTAAPVA TAAGIERLAD VPIYHADPIV RRAGSLQLTA AARAAVRAGL PADLYAQLGL
ANGDAVRVTQ GQRSVVLPAV LDKSLASGVI RVPAATEASA QLGAMFGAVS VEKVESSALA
ATV