| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rpic12D_1788 |
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| Symbol | |
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| ID | 8019444 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Ralstonia pickettii 12D |
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| Kingdom | Bacteria |
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| Replicon accession | NC_012856 |
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| Strand | - |
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| Start bp | 1908461 |
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| End bp | 1909345 |
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| Gene Length | 885 bp |
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| Protein Length | 294 aa |
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| Translation table | 11 |
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| GC content | 65% |
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| IMG OID | 644830572 |
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| Product | peptidase U32 |
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| Protein accession | YP_002981742 |
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| Protein GI | 241663382 |
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| COG category | [O] Posttranslational modification, protein turnover, chaperones |
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| COG ID | [COG0826] Collagenase and related proteases |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 9 |
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| Plasmid unclonability p-value | 0.175461 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 22 |
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| Fosmid unclonability p-value | 0.636013 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGTCCTACG AAATTTCGCT TGGTCCGCTG CTGTACTACT GGCCGCGGCT ACGGACGTTC
GACTTTTACG CAGAAGTGGC CGCCAGTCCT GTCGATATCG TCTACGTGGG CGAGACGGTT
TGCAGCCGCC GCCACGAATT GCGCGCGGAC GACTGGCTTG ATATCGCCGC CATGCTGCGC
GAGGCCGGCA AGTCGGTTGT GCTGTCGACG CGCACACTCA TCGAAACCAG TGCCGAGGCG
CAGGCGTTGC GCAAGCAATG TCAGCAAGAC GCCTGGATGG TCGAAGCCGG CGAGCTTGGC
GCCGTGCGTT TGCTGAGCGG CCGGCCCTTC GTTGCCGGGC CGCATTGCAA CGCGTATCAC
GGCGCGACCC TGGCGTGGCT GGCTGGGCTG GGCGCGGTGC GTGCGGTCAT GCCGCTGGAG
ATGGGTCAGG ACACACTGGC CGATCTGATG CGCGAGAAGC CGGCAGAGTT GGCGATCGAA
GCGATGGTGT GGGGACGCTT GCCGCTGGCA TTTTCCGCAC GCTGCTTTAC GGCGCGGCAC
TTTCGCCTCA ACAAGGACGA CTGCGGATTC CGCTGCATCG AGCATCCCGA TGGCCTGGCG
GTGCGCACGC GCGAAGGGCA GGAGTTTCTC GCCATCAACG GTATCCAGAC GCAATCAGGG
CAATGCCTCG ACATTCTCGA TCAGGCGCCC GCGCTGTCTG CGCTGGGTGT GAAGGTGTTG
CGTGTCAGCC CGCAATCGCG CGGCACGCTG GACGCCGTGG CAGCACTGGA TGCCCTGCGC
CTGGGCCTGC CTGTGCGGGA CGTGCAGCCG CCGGAGGGCA TTGGGCGCTG CAATGGCTAC
TGGCATGGGC AGTCCGGCAT TGAGTGGCTG GAGATGCCGC AATGA
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| Protein sequence | MSYEISLGPL LYYWPRLRTF DFYAEVAASP VDIVYVGETV CSRRHELRAD DWLDIAAMLR
EAGKSVVLST RTLIETSAEA QALRKQCQQD AWMVEAGELG AVRLLSGRPF VAGPHCNAYH
GATLAWLAGL GAVRAVMPLE MGQDTLADLM REKPAELAIE AMVWGRLPLA FSARCFTARH
FRLNKDDCGF RCIEHPDGLA VRTREGQEFL AINGIQTQSG QCLDILDQAP ALSALGVKVL
RVSPQSRGTL DAVAALDALR LGLPVRDVQP PEGIGRCNGY WHGQSGIEWL EMPQ
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