| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rpic12D_1492 |
|---|
| Symbol | |
|---|
| ID | 8019137 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Ralstonia pickettii 12D |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_012856 |
|---|
| Strand | - |
|---|
| Start bp | 1575218 |
|---|
| End bp | 1576006 |
|---|
| Gene Length | 789 bp |
|---|
| Protein Length | 262 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 63% |
|---|
| IMG OID | 644830270 |
|---|
| Product | ABC transporter related |
|---|
| Protein accession | YP_002981451 |
|---|
| Protein GI | 241663091 |
|---|
| COG category | [E] Amino acid transport and metabolism |
|---|
| COG ID | [COG0411] ABC-type branched-chain amino acid transport systems, ATPase component |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 10 |
|---|
| Plasmid unclonability p-value | 0.221725 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 20 |
|---|
| Fosmid unclonability p-value | 0.375358 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGAGCCAAC CGACATCCGG GCCGACCGCC GCGCTCGAGT TGCGCGATGT TCGCAAGCGC
TTTGGCGCCA CTGAAATCAT TCGGGGGGTC AACCTCACCA TCGGCAAGGG CGAGCGCCAC
GCGCTCATCG GGCCGAACGG CGCCGGCAAA TCGACCACGT TCAACCTGAT CTCGGGCCGC
TTCCCGGCCA GTTCGGGAAG CGTACGCCTG AACGGCGAAG AGATCAGCGG CCTGGCGCCG
TTCGAGATCA ACCGCAAGGG CCTGTCGCGC AGCTTCCAGA TCACCAACAT CTTTCATCGC
TTGTCGGTGT TCGAGAACCT GCGCTGCGCG GTGCTCTGGT CGCTTGGCTA CAAGTATTCG
TTCTGGCACA AGCTGGCAGA GCTGCGCGAC GCACGCGAGC GCGCTGAGGA AGTACTCGAG
CAGATCGGCA TGACGCATCG GCGTGAGGCC GCTGCAGGCC TGCTGACCTA CGCCGAGCAA
CGGGCGCTGG AAATCGGCAT CACCATCGCC GGTGGTGCCG ACGTGATTCT GCTGGATGAA
CCCACGGCCG GCATGAGCCG CTCCGAATCC GACCATGCGG TCGAGCTTAT CCGCAAGGTC
ACGGTGGGCA AGACGCTGGT GATGGTCGAG CACGACATGA GCGTGGTGTT TGGCCTCGCC
GACCGCATCT CGGTACTCGT CTACGGCGAA GTGATCGCCA CCGACACACC CGAAGCCATT
CGCAACAACC GGCGCGTGAA AGAAGCCTAC CTGGGCACCA CGCTGGACGA ACCTGCAGGA
GCGCATTGA
|
|---|
| Protein sequence | MSQPTSGPTA ALELRDVRKR FGATEIIRGV NLTIGKGERH ALIGPNGAGK STTFNLISGR
FPASSGSVRL NGEEISGLAP FEINRKGLSR SFQITNIFHR LSVFENLRCA VLWSLGYKYS
FWHKLAELRD ARERAEEVLE QIGMTHRREA AAGLLTYAEQ RALEIGITIA GGADVILLDE
PTAGMSRSES DHAVELIRKV TVGKTLVMVE HDMSVVFGLA DRISVLVYGE VIATDTPEAI
RNNRRVKEAY LGTTLDEPAG AH
|
|---|
| |