Gene Rpic12D_1015 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRpic12D_1015 
Symbol 
ID8018650 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRalstonia pickettii 12D 
KingdomBacteria 
Replicon accessionNC_012856 
Strand
Start bp1069534 
End bp1070469 
Gene Length936 bp 
Protein Length311 aa 
Translation table11 
GC content67% 
IMG OID644829796 
ProductAldose 1-epimerase 
Protein accessionYP_002980986 
Protein GI241662626 
COG category[G] Carbohydrate transport and metabolism 
COG ID[COG2017] Galactose mutarotase and related enzymes 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones17 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones32 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCATAGCA AGACTTGGCT TGCGCCTGGC TCGGTGCACA CGCTGCGGGC CGGCGCGTTG 
ACGATGGACG TCGCCCCGGC GGCAGGTGGA CGCATTGCCT CGCTGGCTTC GGCCGGCGAG
GGCGGCCAGC GTGTCGACTG GTTGGCGCCG ATGTCGGCCG AGTCCTTGCG CGACGGCTTC
GAGGGGCTGG CATGGCCCAA GGCCGGCTGC TATCCGCTAC TGCCGTTCTC CAACCGCATC
CGCGATGGGC GCTTTGAATG GGGCGGCCGC GAGATCCGTC TCGCGCCGCA TCCCGGCCAG
GCCCACGCCA TGCACGGACT GGCGCATGCG CGTGCTTGGA CGGTGGAGCG GATGACAGCG
TCGTCGATCG AACTCGGCTT GCGCTATGTG CCCGAGGCAG ACAGCTGGCC CTGGCCTTTC
ACCGCAACGC AAACGCTGGT GCTGACTGAA TCCGGGCTGG ATGCCGTCAT GACGCTGCGC
AACGATGGCG ACAGCAGTAT GCCGGCCGGT GGCGGCTTCC ATCCATACTT CGCACGCACG
GCCGATACGC GCGTGCAGTT CGATGCTGCG ACGATGTGGC CGACCGACGC CGGTGAAGTT
GCCGTCCGCC GCGAGCCGAT CACGCCGCGG GAAGATTTTC GTCACGCCCG TGCATTACCC
GATGCCGCGC TCAGCGTCTA CTACAGCGAA TGGCAGCAAC GTGCGGTGGT GTCCCGCGCG
GGCGGCGAGC TCACGCTGAG CGCCGATGAC CCGCTCGACC ACTTCATCCT GCACGCACCG
GACGCGCAGC CGTATTTCTG CCTGGAGCCC ATTTCACATG TGTCCGACGC CATCAACCTG
GCGGCACAAG GATGGGAAGG CACTGGCCTG CGCGCTTTGG CGCCTGGCGA GACGTTGCAC
ATGCGCATGC AACTGCGCAT CGAGGCAATG GCCTGA
 
Protein sequence
MHSKTWLAPG SVHTLRAGAL TMDVAPAAGG RIASLASAGE GGQRVDWLAP MSAESLRDGF 
EGLAWPKAGC YPLLPFSNRI RDGRFEWGGR EIRLAPHPGQ AHAMHGLAHA RAWTVERMTA
SSIELGLRYV PEADSWPWPF TATQTLVLTE SGLDAVMTLR NDGDSSMPAG GGFHPYFART
ADTRVQFDAA TMWPTDAGEV AVRREPITPR EDFRHARALP DAALSVYYSE WQQRAVVSRA
GGELTLSADD PLDHFILHAP DAQPYFCLEP ISHVSDAINL AAQGWEGTGL RALAPGETLH
MRMQLRIEAM A