| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rpic12D_0906 |
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| Symbol | |
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| ID | 8018538 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Ralstonia pickettii 12D |
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| Kingdom | Bacteria |
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| Replicon accession | NC_012856 |
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| Strand | + |
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| Start bp | 948321 |
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| End bp | 949640 |
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| Gene Length | 1320 bp |
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| Protein Length | 439 aa |
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| Translation table | 11 |
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| GC content | 67% |
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| IMG OID | 644829686 |
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| Product | major facilitator superfamily MFS_1 |
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| Protein accession | YP_002980879 |
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| Protein GI | 241662519 |
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| COG category | [G] Carbohydrate transport and metabolism |
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| COG ID | [COG2814] Arabinose efflux permease |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 12 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 27 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGTCGAACC ACACCTCTGC GCCGTCGTAC GCCGGCCGCG CCGGCACGCA GGCGACCGGC
CACGCCCAAC CGCTGTCACG CAAGCGCGCC ATTGCCGCCA TCACCATCGG CAACGGCCTG
GAGTTCTATG ACTTTGTGGT CTACAGCTTC TTCGCCACGT TGATCGGCCG GCTGTATTTT
CCCGTTGGCA ACGCGACCGG CCAGTTGCTG ATGTCGTTCG CCACGTTTGG CGTCGGCTTC
CTGATGCGGC CGCTCGGCGG TCTGCTGATC GGCATGTACG CCGACCGCGC AGGCCGCAAG
CCCGCCGTGG CGCTCACGCT GTGGCTGATG GGCCTGTCGT CGCTGATCTT CGTCGTCACG
CCGACCTACG CCCAGATCGG CATCCTCGCG CCCATGTTCG TCGTGCTGGC GCGGCTGGTG
CAGGGCTTTG CCATCGGCGG CGAGATGGGC GCTTCGACAG CGCTGCTGCT GGAGTACGCC
GACGACCGCT CGCGCGGTTT CTACACGAGC TGGCAGCCGT TCAGCCAGGG GCTGGCGGCG
CTGTTTGGCG CGCTGGTCGG CTTGCTGCTG AGCAATGTGC TGGCGCCCTC GGCACTGGAG
TCGTGGGGCT GGCGGCTCGC ATTCGTGATC GGCATTCTCG TGATCCCGGT CGGCCTGATC
ATCCGACGCC GGCTGGAGGA AACCGCCGCA TCGCCCAGCA CGCGCGAAGC CGACGCCACG
CTGCCGCTGC TGCGCGAACA CCGTCGCACG CTGGTGGCGA GCATTCTGCT GATGATCGGC
GTGGCGTCGT CCACGTACAT CATCGTGTAC TACCTCAGCA ACTACGCCGT GAGCGTGCTG
CACATGCCGC TGTCGCTGGG CATCTGGGCG GCGTGCATAG CGGCGCTGGT GCAGGTAGTA
CTGTCGCCGT TTGCGGGCCG GCTGGCCGAT CGCGTCGGGC GCCGCAAGGT CGTGCTGTGG
TCGCGCGTTG CGCTGCTGGC GATGATCTAT CCGGCCTTCG CGCTCATCAA CGCCGACCCT
TCGCTGACTC GGTTGCTGAT CGTGGTCGGC TGCCTGTCGG TGCCGATGTC GATGACCTCG
CCGGCATCGA TGGTGCTGGT GAGCGAGGTG CTGCCGCAGC GGCTGCGCGC CACGGGGCTG
TCGATTGCCT ACTGTGTGGC CATTGCGATC TTCGGTGGAT TTGCGCAGTT CTTCTCCACC
GAGTTGATCC ACCTCACGGG CAACGCGAAT GCGCCGGCCT TCTACGTGAT CGGCTGCGGG
CTGGTCTCGC TGATCGGGCT GGCGATGGTG CCCGAAACGC TGGGCCGCCG CCTCTCGTAA
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| Protein sequence | MSNHTSAPSY AGRAGTQATG HAQPLSRKRA IAAITIGNGL EFYDFVVYSF FATLIGRLYF
PVGNATGQLL MSFATFGVGF LMRPLGGLLI GMYADRAGRK PAVALTLWLM GLSSLIFVVT
PTYAQIGILA PMFVVLARLV QGFAIGGEMG ASTALLLEYA DDRSRGFYTS WQPFSQGLAA
LFGALVGLLL SNVLAPSALE SWGWRLAFVI GILVIPVGLI IRRRLEETAA SPSTREADAT
LPLLREHRRT LVASILLMIG VASSTYIIVY YLSNYAVSVL HMPLSLGIWA ACIAALVQVV
LSPFAGRLAD RVGRRKVVLW SRVALLAMIY PAFALINADP SLTRLLIVVG CLSVPMSMTS
PASMVLVSEV LPQRLRATGL SIAYCVAIAI FGGFAQFFST ELIHLTGNAN APAFYVIGCG
LVSLIGLAMV PETLGRRLS
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