| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rpic12D_0667 |
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| Symbol | |
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| ID | 8018293 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Ralstonia pickettii 12D |
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| Kingdom | Bacteria |
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| Replicon accession | NC_012856 |
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| Strand | + |
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| Start bp | 699835 |
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| End bp | 702117 |
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| Gene Length | 2283 bp |
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| Protein Length | 760 aa |
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| Translation table | 11 |
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| GC content | 66% |
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| IMG OID | 644829442 |
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| Product | DEAD-like helicase |
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| Protein accession | YP_002980640 |
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| Protein GI | 241662280 |
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| COG category | [K] Transcription
[L] Replication, recombination and repair |
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| COG ID | [COG0553] Superfamily II DNA/RNA helicases, SNF2 family |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 4 |
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| Plasmid unclonability p-value | 0.0881388 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 23 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGTCCCTCG ATACCGACGT TGTTCCCGCC GCCGAAGGCA CGCCCATCCA GGGCGACCTG
CTCGAAGCGG CTGCTTCTTC CCTGGCGATG AGCCTCCAGG ATTTCGTTGC CGAATTCGGC
GACGAGCTGC TGGATTCGCT CAACCGCGCC AATCCACCCG TCTACACCGG CCAGGCCCGG
CCGCACCGCC AGATCGTGCT GGCCAGTCTC AAGCGCAAGC TGTTCCAGGC GCAGGCCGAG
GTGGTGCATG CCGTCATCGA ACTGCTGGCC GACCGTGGCG AACGCGCCGC GATCGTCAAT
GGCGAGATGG GCTGCGGCAA GACGACCGTC GGTATCGCCA CGGCCGCCGT GCTGCACGCC
GAAGGCTACC GCCGCACTCT GGTGCTGTCG CCGCCCCACC TGGTCTACAA GTGGCGCCGC
GAAATCCAGG AGACGGTGGC CGGTGCCAAG GTCTGGGTGC TCAATGGCCC GGACACGCTG
GTCAAGCTCA TCAAGCTGCG CGAGCAGTTG GGCGTGCCGG CGCGCGGCCA GGAGTTCTTC
GTGCTCGGGC GCGTGCGGAT GCGCATGGGT TTCCACTGGA AGCCCGTCTT CAACGTGCGG
CGCACGCGGC ACGGCGAAGT AGGCGCATGC CCGGACTGCG GCCAGATCAT CACCAACCTC
GACGGCGAGC CGATCAACCC GGTCGAACTC GAAGCCGAGG ACTACCGCCG CCGGTGCAGC
CATTGCGCCG CACCGCTGTG GACGCTGATG CGACCGAGGA GCCTGTCCGC CAGCGACCAG
TCCACGGCCG TCTTCAAAGC CTTGCAGCGC ATCCCGACCA TCGGGGAAGT CACCGCGCAG
AAGCTGATGC GCAAGTTCGG CGACTCCTTC CTGGCGTCCA TGCTCGGCGA CAACATCCAC
GAGTTCATCA ACCTCATGGA TGGGAACGGC GAGCTGGTCT TCTCGGATCG TCAAGCGCAC
CGCATGGAGC GGGCGATGGC GAACATGGAG TTCGGCTTCG GCGAGGGAGG CTACCAGCCG
TCCGAGTTCA TCAAGCGCTA CCTGCCGCAA GGCACGTTCG ACCTGCTCAT CGCCGACGAG
GCGCACGAGT ACAAGAACGG CGGCAGCGCC CAGGGCCAGG CCATGGGCGT GTTGGCGGCC
AAGGCACGCA AGACGCTGCT GCTCACCGGC ACGCTGATGG GCGGCTACGG CGACGACCTT
TTCCACCTGC TGTTCCGAGC CCTGCCGGGG CGAATGATCG AAGATGGCTA CCGCCCGACC
AAGAGCGGCA GCATGACCTC GGCCGCGATG GCGTTCATGC GCGATCACGG CGTCCTCAAG
GACATCTATT CCGAGAGCAC CGGCACGGCG CACAAGACGG CCAAGGGCAA CAAGGTCTCG
GTGCGCACGG TCAAGGCGCC GGGCTTCGGC CCGAAGGGCG TGCTGCGTTG CGTGCTGCCG
TTCACGGTCT TCCTCAAGTT GAAGGACATC GGCGGCAATG TGCTGCCGCC CTACGACGAG
GAGTTCCGCG AGGTGGCGAT GGACACGGCG CAAGCCGCGG CCTATCGCGA TCTGTCGGGT
CGGCTGACCA CAGCGCTGAA ACAGGCGCTG GCGAAGCGCG ACACGACGCT GCTCGGCGTG
GTCCTCAACG TGCTGCTGGC CTGGCCGGAT TGCTGCTTCC GGTCGGAGAC GGTGGTGCAC
CCGCGCACGC GCCAGACCTT GGCCTTCGTT CCGGCTCAGT TCAACGAGCT GGAGGTGATG
CCCAAGGAGC GCGAGCTGAT CGAGATCTGC AAGCAGGAGA AGGCTGCGGG TCGCAAGACG
CTGGTCTATT CGGTCTACAC CGGCACGCGC GACACCACGT CGCGCCTGAA GGTGCTGCTG
GAGCAGGAAG GCTTCAAGGT GGCAGTGCTG CGCGCAAGCG TGGATGCCTC CCGCCGCGAG
GACTGGATCG CCGAGCAGTT GGATCGCGGC ATCGACGTGC TCATCACCAA CCCGGAGTTG
GTCAAGACCG GGCTGGACTT GTTGGAGTTT CCGACGATCG TGTTCATGCA GTCGGGCTAC
AACGTCTATA GCCTGCAGCA GGCGGCCCGG CGCTCGTGGC GCATCGGCCA GAAGCAGCCG
GTTCGCGTGA TCTACCTCGG CTACGCGGCT TCCTCGCAGA TGACCTGCCT GGGGCTGATG
GCCCGAAAGA TCATGGTCTC GCAAAGCACG TCGGGAGACG TGCCCGAATC GGGACTGGAT
GTGCTGAACC AGGACGGTGA TTCCGTCGAG GTGGCACTGG CCCGGCAGCT CGTCGCGGCC
TGA
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| Protein sequence | MSLDTDVVPA AEGTPIQGDL LEAAASSLAM SLQDFVAEFG DELLDSLNRA NPPVYTGQAR
PHRQIVLASL KRKLFQAQAE VVHAVIELLA DRGERAAIVN GEMGCGKTTV GIATAAVLHA
EGYRRTLVLS PPHLVYKWRR EIQETVAGAK VWVLNGPDTL VKLIKLREQL GVPARGQEFF
VLGRVRMRMG FHWKPVFNVR RTRHGEVGAC PDCGQIITNL DGEPINPVEL EAEDYRRRCS
HCAAPLWTLM RPRSLSASDQ STAVFKALQR IPTIGEVTAQ KLMRKFGDSF LASMLGDNIH
EFINLMDGNG ELVFSDRQAH RMERAMANME FGFGEGGYQP SEFIKRYLPQ GTFDLLIADE
AHEYKNGGSA QGQAMGVLAA KARKTLLLTG TLMGGYGDDL FHLLFRALPG RMIEDGYRPT
KSGSMTSAAM AFMRDHGVLK DIYSESTGTA HKTAKGNKVS VRTVKAPGFG PKGVLRCVLP
FTVFLKLKDI GGNVLPPYDE EFREVAMDTA QAAAYRDLSG RLTTALKQAL AKRDTTLLGV
VLNVLLAWPD CCFRSETVVH PRTRQTLAFV PAQFNELEVM PKERELIEIC KQEKAAGRKT
LVYSVYTGTR DTTSRLKVLL EQEGFKVAVL RASVDASRRE DWIAEQLDRG IDVLITNPEL
VKTGLDLLEF PTIVFMQSGY NVYSLQQAAR RSWRIGQKQP VRVIYLGYAA SSQMTCLGLM
ARKIMVSQST SGDVPESGLD VLNQDGDSVE VALARQLVAA
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