Gene Rpic12D_0629 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRpic12D_0629 
Symbol 
ID8018255 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRalstonia pickettii 12D 
KingdomBacteria 
Replicon accessionNC_012856 
Strand
Start bp665517 
End bp666086 
Gene Length570 bp 
Protein Length189 aa 
Translation table11 
GC content61% 
IMG OID644829407 
Productheat shock protein Hsp20 
Protein accessionYP_002980605 
Protein GI241662245 
COG category[O] Posttranslational modification, protein turnover, chaperones 
COG ID[COG0071] Molecular chaperone (small heat shock protein) 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones18 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones18 
Fosmid unclonability p-value0.185609 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGACATTG ATTTCAAGAA ATTGGCTCCC TGGAACTGGT TCAAGAAGGA GCAGGAAGAA 
CAACAGAGCA CTGCCTCGCT CCCGGTGCAG CGCAATGACC TGCCGGTGGC GGGTGGGCCC
GTCAGTCCCA TCCTGCAATT GCATCGCGAG ATCGACCGCC TGTTCGACGA CGCGTTTCGA
GGCTTCGGTT TCCCGACGCT GGCCATGCCA CGCTGGCCGT CGGACTGGCC GGGCATGCTG
AAGCCGGCGC TGGACATCCA GGAGACCGAC AAGCAGTACA AGATCGCCCT GGAAGTACCC
GGCATCGAGG AAAAAGACAT CCAGATCACG CTCGACAACG ACGTGCTGCT GGTGCGCGGT
GAAAAGCGTC AGGAGCAGGA AACGAAAGAC GGCGGTTTCC ATCGGGTGGA GCGCTCCTAC
GGCAGCTTTC AGCGCGCTCT GAACCTGCCG GCCGATGCCA ACCAGGACAC GATCAAGGCC
GCTTTCAAGA ACGGCGTGCT CACGATCACG ATGGAAAAGC GCGAGGCCAG TACGCCCCAG
CAGGGGCGCT CGATCCCGAT CAACGGCTGA
 
Protein sequence
MDIDFKKLAP WNWFKKEQEE QQSTASLPVQ RNDLPVAGGP VSPILQLHRE IDRLFDDAFR 
GFGFPTLAMP RWPSDWPGML KPALDIQETD KQYKIALEVP GIEEKDIQIT LDNDVLLVRG
EKRQEQETKD GGFHRVERSY GSFQRALNLP ADANQDTIKA AFKNGVLTIT MEKREASTPQ
QGRSIPING