| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rpal_4983 |
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| Symbol | |
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| ID | 6412675 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Rhodopseudomonas palustris TIE-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011004 |
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| Strand | + |
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| Start bp | 5362130 |
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| End bp | 5365594 |
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| Gene Length | 3465 bp |
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| Protein Length | 1154 aa |
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| Translation table | 11 |
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| GC content | 70% |
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| IMG OID | 642714866 |
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| Product | chromosome segregation protein SMC |
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| Protein accession | YP_001993947 |
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| Protein GI | 192293342 |
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| COG category | [D] Cell cycle control, cell division, chromosome partitioning |
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| COG ID | [COG1196] Chromosome segregation ATPases |
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| TIGRFAM ID | [TIGR02168] chromosome segregation protein SMC, common bacterial type |
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Plasmid Coverage information |
| Num covering plasmid clones | 9 |
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| Plasmid unclonability p-value | 0.127534 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAAACTCA CGCGTCTCCG CCTCCACGGC TTCAAGTCGT TTGTCGAGCC CACCGACTTC
ATGATCGAGC CGGGTCTGAC CGGCGTGGTC GGGCCGAACG GCTGCGGCAA GTCCAATCTG
GTGGAAGCGC TGCGCTGGGC GATGGGCGAA ACCTCGCACA AATCGCTGCG TGCGACGGAC
ATGGACGCGG TGATCTTCGC CGGCTCGGGC AACCGCCCTG CCCGCAACCA CGCCGAAGTG
GTGATGTCGA TCGACAATTC CGATCGCACC GCGCCGGCGG CGCTGAACGA TGCCGACACG
CTCGACATCT CGCGCCGGAT CGAGCGCGAG GCCGGCTCGG TGTATCGCAT CAACGGCCGC
GAAGTGCGCG CCCGCGACGT GCAACTGCTG TTCGCCGACG CCGCCACCGG CGCCCGGTCG
CCGGCGCTGG TCCACCAGGG CAAGATCGGT GAAATCATCC AGGCCAAACC GGAACAGCGA
CGCCGCGTGC TGGAAGACGC CGCCGGCGTC GCCGGCCTGC ACGCCCGCCG GCATGAAGCC
GAACTGCGGC TGAAGGCGGC CGAAACCAAC CTGACCCGCG TCGAGGACGT GATCGGCCAG
CTGTCAACCC AGGTCGACGG CCTGAAGAAG CAGGCGCGCC AGGCGATCCG GTTCCGCGAG
GTCGCCGCCA AGGTCCGCAA GACCGAGGCG ATGCTGTATC ACCTGCGCTG GCGCGACGCG
CAGGCCGAGG TCGGCGCGGC CGCCGAGGTG CACGATCTCG GCGTGCGGCA GCTCGCCGAA
TGCACCCGCG TGCAGGCCGA AGCCTCCCGC ATCCAGGCCG ATCGCGCTTC CACTTTGCCG
AGCCTGCGCG AGGCTGAAGC CCGCGCCGCT GCCGGCCTGC AGCGACTGAT CAATGCCCGC
GAACAGCTCG ACCGCGAAGA AGCCCGCGCC AAGGAGCGCG TGGTCGAACT GGAGCGGCGG
CTGACGCAGT TCTCCTCCGA CGTCGCGCGC GAGCAGCAGC AGGCGATCGA CGCCGACGCC
GCGCTGGAAC GGCTCGACAC CGAAGACGTC GAGCTGCGCG AGGAGATCCT GGAGCGGGTC
GAGAAGCGCA GCGGCGTCGA CGAGCGCGTC GCCGAAGCCG ATGCCTCGCT GAGCGAGGCC
GAGCAGCTGT TTGCCGAACT CACCACCCAG CTCGCCGAAC TCACCGCGCG GCGCAACCAG
TTCGAGCAGA GCGTCCGCAC CCATCGCGAC CGGCTGGCGC GGCTCGACAC CGAGATCAAG
AACGTCGAGA GCGAGATCGA CCGGCTCTCC GCCGAGACCT CCGGCGCCGG CGACCTCACC
GAACTTGCCG AAGCGGTCGA GATCGCCCAG GAGCTGCTCG CCGAGCAGGA AGGCGCGGTG
CAGGAAGCGG AAGCTGCACA AATCGCCGCG CGGCAGACGC TGGACGGCTC GCGAGCACCG
CTGGTCGACG CCGAAAAGAA GGTGCAGCGG CTCGAGACCG AAGCCAAGAC CATCAGCAAG
ATCCTCAACG GCGAGACCAA GAATCTGTGG CCGCCGATCA TCGACGGCAT CACCGTCGCC
AAGGGCTATG AAAAAGCGAT CGGCGCCGTG CTCGGCGACG ATCTCGACGC GCCGGTCGAT
CCCTCGGCAC CGATGCGCTG GACCGATGTC GGCGTGCAGC CGGAAGATCC GGCGCTGCCG
GAAGGCGTCG AAGCGCTGGC GCAGCACGTC ACCGCGCCGC CGGAGCTGGC GCGCCGCCTC
GCTCAGATCG GCGTCGTCAC CAAGGAGCGC GGCAATGAGC TGTGCGAACA ACTCAAGACC
GGCCAGCGGC TGGTGTCGCT CGATGGCGAC GTCTGGCGCT GGGACGGCTT CGTCGCCTCG
GCCCATGCGC CGACCGGCGC CGCCCGCCGC CTCGCCGAAC GCGCGCGCCT GACCGATATC
GAGAACGAAC TCGAGCAGGC CCGGATCGAG GCCACCGCCA AGCGCCAGGC GCTGGAAACC
GCGGAAGCCG ACTTGAAGAT GGCCGCCGCC GCCGAGACCG CCTCGCGCGA GAGCCTGCGC
GGCGCCCGGC GCGAGGTCGA CGCCGCACGC GAGCGCTTCG CCGCCGCCGA GCGCGAGGTC
AACCGCCACG CCGCGCGCAA ATCGGCGCTC GCCGAAGCGC AGTCGCGGCT CGCCACCGAC
CGCGCCGAAG CCGAAGCCGC GCTGGAGAAC GCCGAGGCCC AGATCGCCGA CCTGGAGCCG
AACACCGAGG CCGAAGCCCG CCTCGCCGCG GTGCGCGGCG ACATCGACGG CCGCCGCCGC
ATCGCCGCGC AGATCCGCGC CGAAGCCCAG GCGCTGGCGC GCGAAGCCGA GCTCGCCGAC
AAGCGGCTGC AGGCGATCGC CGCCGAGCGG ATGGACTGGC AGAAGCGCAA GGCCGGCGCG
GCGTCGCAGA TCGCCACCGT CGAAGAGCGT GTCGCCGAAC TCACCGCCGA GCGCGCCGAG
CTCGAGAACG CGCCGGAAGT GTTCGCCGAG AAGCGCAGCG CGGTGATCAC CGAGATCGAA
TTCGCCGAAG CCGATCGCCG CGCCGCCGCC GACGCGCTGG CCGCCGCCGA ACAGGCGATG
TCCGAGACCG ACCGCCTGGC GAAAGCCTCG CTCGAACAGC TCTCCAGCGC CCGCGAAGCC
TGCGCCCGCG CCGAGGAGCG GATGGAAGCG GCCCGCCGCC GGCTCGAAGA CGTCGAGCGC
GAAATCCGCG ACATGCTCGA GGTCGAGCCG CAAGCCGCCG CCCAGCTCGC CGAAATCGTC
GAAGGCGCTG AACTGCCGCC GCTCGCCGAG ATCGAAGAGA GCCTGGACAA ACTGCGCCGC
GACCGCGAGC GGCTCGGCGC CGTCAACCTG CGCGCCGAGG AAGAACTCAA CGAGGTCGAG
ACTCAGCACG GCACGCTGGC GGCCGAGCGC GACGACCTCG TCGAAGCGAT CAAGAAGCTG
CGCACCGGCA TCCAGAGCCT CAACAAGGAA GCCCGCGAGC GGCTGCTCGC CTCGTTCGAC
GTCGTCAACG GTCACTTCAA GCGGCTGTTC ACCACGCTGT TCGGCGGCGG CGAAGCCGAG
CTGAAGCTGA TCGAAAGCGA CGATCCGCTC GAAGCCGGTC TCGACATCAT CGCCAAACCG
CCGGGCAAGA AGCCGCAGTC GCTGTCGCTG CTCTCGGGCG GCGAGCAGGC GCTGACCGCG
ATGGCGCTGA TCTTCGCGGT GTTCTTGACC AACCCGTCGC CGATCTGCGT GCTGGACGAA
GTTGACGCGC CGCTCGACGA CCACAACGTC GAACGGTTCT GCGACCTGCT CACCGACATG
GCGAAGACCA CGGAAACGCG GTTCATCACC ATCACCCACA ACCCGATCAC CATGGCCCGC
ATGAACCGCC TGTTCGGCGT CACCATGGCC GAACGCGGCG TGTCCCAGCT CGTCTCCGTC
GACCTCCAGG GCGCGGTCGA TATTCTGGAT CAGAACGTGG CGTGA
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| Protein sequence | MKLTRLRLHG FKSFVEPTDF MIEPGLTGVV GPNGCGKSNL VEALRWAMGE TSHKSLRATD
MDAVIFAGSG NRPARNHAEV VMSIDNSDRT APAALNDADT LDISRRIERE AGSVYRINGR
EVRARDVQLL FADAATGARS PALVHQGKIG EIIQAKPEQR RRVLEDAAGV AGLHARRHEA
ELRLKAAETN LTRVEDVIGQ LSTQVDGLKK QARQAIRFRE VAAKVRKTEA MLYHLRWRDA
QAEVGAAAEV HDLGVRQLAE CTRVQAEASR IQADRASTLP SLREAEARAA AGLQRLINAR
EQLDREEARA KERVVELERR LTQFSSDVAR EQQQAIDADA ALERLDTEDV ELREEILERV
EKRSGVDERV AEADASLSEA EQLFAELTTQ LAELTARRNQ FEQSVRTHRD RLARLDTEIK
NVESEIDRLS AETSGAGDLT ELAEAVEIAQ ELLAEQEGAV QEAEAAQIAA RQTLDGSRAP
LVDAEKKVQR LETEAKTISK ILNGETKNLW PPIIDGITVA KGYEKAIGAV LGDDLDAPVD
PSAPMRWTDV GVQPEDPALP EGVEALAQHV TAPPELARRL AQIGVVTKER GNELCEQLKT
GQRLVSLDGD VWRWDGFVAS AHAPTGAARR LAERARLTDI ENELEQARIE ATAKRQALET
AEADLKMAAA AETASRESLR GARREVDAAR ERFAAAEREV NRHAARKSAL AEAQSRLATD
RAEAEAALEN AEAQIADLEP NTEAEARLAA VRGDIDGRRR IAAQIRAEAQ ALAREAELAD
KRLQAIAAER MDWQKRKAGA ASQIATVEER VAELTAERAE LENAPEVFAE KRSAVITEIE
FAEADRRAAA DALAAAEQAM SETDRLAKAS LEQLSSAREA CARAEERMEA ARRRLEDVER
EIRDMLEVEP QAAAQLAEIV EGAELPPLAE IEESLDKLRR DRERLGAVNL RAEEELNEVE
TQHGTLAAER DDLVEAIKKL RTGIQSLNKE ARERLLASFD VVNGHFKRLF TTLFGGGEAE
LKLIESDDPL EAGLDIIAKP PGKKPQSLSL LSGGEQALTA MALIFAVFLT NPSPICVLDE
VDAPLDDHNV ERFCDLLTDM AKTTETRFIT ITHNPITMAR MNRLFGVTMA ERGVSQLVSV
DLQGAVDILD QNVA
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